Results for "Algorithm Analysis"
Users
Skills: Algorithm Analysis3646 days ago
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analy...abbit hole and possibly never getting a solution. Learn to perform root cause analysis, learn enough about the under...3948 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and t...UI software for computational analysis? Should I use commercial bioi...to accomplice your biological analysis work. This means that if you...3705 days ago
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Bookmarks
- I bet, this website will be your best friend in near future. This helps us to explore t...from it. You can find some useful open source bioinformatics codes for your analysis work. You can use the left ba...
3913 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Document...for Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and Mining with R.3913 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has...used for automatic prediction of trans-membrane (TM) protein structure. While algorith...3942 days ago
- Bioinformatician life is interconnected, they always dream for a powerful server, little more space on server as they are generating lots of data per run, dream to publish results in good impact journals, meetings reminders :) and research analysis off course!!!
3907 days ago
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Discussion topics
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the...ised MinION™ device. These are a new generation of electronic molecular analysis system for use in scientific...3810 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigasci...ts-soul-searching.html http://assemblathon.org/post/44431915644/feedback-and-analysis-of-the-assemblathon-2-p &nbs...3917 days ago
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Pages
Bio++ : C Language libraries for your biological need
...stract and fluent to describe algorithms and interactions in a wide v...ke GenBank, EMBL or SwissProt,Algorithms for plotting trees, with sup...formatics, including sequence analysis,phylogenetics, molecular evolu...of C++ libraries for sequence analysis, phylogenetics, molecular evo...3945 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing,...3945 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequ...the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequenc...
3945 days ago
- ...of biological predictions and analysis" -- Jitendra Narayan "Th...collection, organization and analysis of large amounts of biological...to provide raw data for later analysis. Once the raw data are availa...of protein domains. Combined analysis of structural and genomic dat...
3945 days ago
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Wire posts
News
- PhylomeDB is a public database for complete collection...y and paralogy predictions which are based on the analysis of the phylogenetic trees. Th...ims at providing a high-quality phylogenetic analysis of different genomes , i...
3916 days ago
- In current era, we are handling huge amount of genomics data, and analysing it to make...iological sense out of it. Large-scale sequence studies requiring BLAST-based analysis produce huge amounts of data...
3887 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Clim...to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flagship...omputational facilities and expertise in NGS data analysis, and will benefit as well fro...3946 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented know...a prerequisite for this position. Experience with high throughput sequencing analysis methods, machine learning, pr...
3946 days ago
- +198 more Opportunity posts
ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our lon..., with an emphasis on mitosis. We develop in-vitro assays, quantitative image analysis and cytosim, a computer simul...
3946 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical genetics,...pedigrees Investigation of DNA sharing in distantly related individuals CNV analysis in pedigrees and connections...
3945 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna...Structure Dus Numbari GCG Karo Sajana Naukar NCBI Ka 1942 -- A KEGG Story Algorith...3916 days ago
Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
...advances in computing power to perform current methods of analysis. Extracting new science from t...equire not only faster computers; it will require smarter algorithms. We show how ideas from cutting-edge algorithms, including spectral graph t...3899 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming...tion strain Bacillus subtilis. Until now, genome analysis could only be done in nationa...-generation sequencer development has made genome analysis possible in an ordinary lab....3914 days ago
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Bio-Scripts
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GN...ated and ready for import into a spreadsheet program for browsing and further analysis. # use strict; use warni...2912 days ago
Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-W...2903 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a progra...basically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3528 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3524 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the...d genome, transcriptome, proteome, and metabolome analysis to reveal the molecular profi...t provides lots of useful tools for comprehensive analysis and comparison of high-throug...2359 days ago
Groups
R is a free software programming language and a software en...ners for developing statistical software and data analysis. R's popularity has increased...cal packages. Bioconductor provides tools for the analysis and comprehension of high-thr...3948 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of t...3904 days ago
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Tags
Skills: Combinatorics, Graph Theory, Algorithms, Python, Algorithm Design, Algorithm Analysis, Algorithm Development, Statistics, R, Probability, Statistical Data Analysis, Stochastic Processes, Operations Research, Game Theory
3646 days ago
Comments
Comment on "Tools for RNA classification"
...machine learning-based tool that uses a support vector machine (SVM) algorithm to classify RNA sequences. It...equences. It uses a combination of HMM-based and comparative sequence analysis approaches to predict tRNA ge...418 days ago
Comment on "Sibelia: A comparative genomics tool"
...arameters set can be used for analysis of distantly-related genomes....ks are used as input for MGRA algorithm, for example. To get such ou...diagram is more suitable for analysis. Please note that sequences th...tion. As you may notice, the algorithm relies on exact K-mers share...1282 days ago
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