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1759 days ago
Five points for bioinformatics software/tools
...so find this kind of request on any QA forum. I personally believe this coding horror brings the biggest dow...missing the basic flavour of bioinformatics. Let’s dive into the coding world, I am sure your will en...3706 days ago
Computer simulation of genetic mechanism !!
...n http://acb.qfab.org/acb/evolsim/ EvolveAGene A realistic coding sequence simulation program t...nemo2.sourceforge.net/ NetRecodon Coalescent simulation of coding DNA sequences with recombinat...2974 days ago
Junk part of the human genome unlocked
More: Texas A&M Biologists Unlock Non-Coding Half of Human Genome with Novel DNA Sequencing Technique http://www.science.tamu.edu/news/story.php?story_ID=1282#.VDbBQ_mSyyA "thi...3495 days ago
3336 days ago
Prepare for Coding Interview !
This is a comprehensive guide to prepare for your next coding interview. It's great for recent graduates and has questions and practice materials structured from traditional big tech...844 days ago
Bio++ : C Language libraries for your biological need
...e data.Estimation of Wright F-statistics and pairwise genetic distance on codominant markers.Statistics on synonymous and non synonymous sites for coding sequencesVarious 'Neutrality'...3947 days ago
BioRuby :Ruby packages for biologist
...rdoc/ BioRuby Tutorial Websitehttp://dev.bioruby.org/en/?Tutorial.rd Why BioRuby Hub for BioRubyhttp://www.linuxjournal.com/article/5915 Social Coding Hub for BioRubyhttp://www.lin...3946 days ago
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3761 days ago
Bioinformatics PhD studentship available in New Zealand
...line of research over several decades; nevertheless, we are still far from having a complete picture of the regulatory mechanisms of genes and non-coding RNAs, and their influences on...3947 days ago
Postdoc Positions - Mammalian Transcriptome Evolution at SIB
...species (e.g., birds). Topics of current projects based on these data include the origins and/or evolution of protein-coding genes, alternative splicing, microRNAs, long noncoding RNAs, and dosage compensation...3917 days ago
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Install ATOM editor on Elemantory OS / Ubuntu
...n option with `no-` to set it to false such as --no-color to disable colored output. #Atom is essentially a text editor that you can use for coding. But did you know that you ca...1175 days ago
Perl script to find coding regions in DNA sequences
...of a real exon and intron, respectively. Extremely different values of coding potential should be obtained with the two sequences: high values (positive) for coding protein sequences and low val...2154 days ago
Tags: Bioinformatics, Languages, Coding, Programming, Learn, Code, Script
3336 days ago
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
MACSE aligns coding NT sequences with respect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automatic solution to align protein-coding gene datasets containing non-functional sequences (pseudogenes) without disrupt...Tags: MACSE, Multiple, Alignment, Coding, SEquences, Accounting, Frameshifts, Stop, Codons
1902 days ago
Comment on "Tools for RNA classification"
...popular tool for RNA classification that uses a covariance model approach to identify RNA homologs. It is particularly useful for identifying non-coding RNA (ncRNA) sequences. R...420 days ago
Comment on "Running Trinity on RNA-seq !"
...expression analysis. Trinity provides direct support for several DE analysis methods, including edgeR, DESeq2, Limma/Voom, and ROTS. Extract coding regions using TransDecod...2122 days ago