Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bioinformatics Journals (the most recent Impact Fact...sp;(1.647 :: 1.886) Evolutionary Bioinformatics (1.452 :: 1.465) Algorithms for Molecular Biology&n...1114 days ago
Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probab...1152 days ago
Comment on "List of genome announcement, notes and reporting journals"
Computational and Structural Biotechnology Journal for bioinformatics tool publication1235 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1254 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
IEEE Transactions on Knowledge and Data Engineering accepts bioinformatics and algorithms manuscripts https://www.computer.org/csdl/journal/tk1279 days ago
Comment on "URMAP, an ultra-fast read mapper"
...ssor threads to use for mapping. Default is the number of CPU cores or 10, whichever is smaller. The -veryfast option specifies a variant mapping algorithm which is ~3x faster but...1293 days ago
Comment on "Sibelia: A comparative genomics tool"
...quence, such blocks are used as input for MGRA algorithm, for example. To get su...on of this format, see: https://cgwb.nci.nih.gov/FAQ/FAQformat.html#format3...Boundaries correction --------------------- Algorithm of "Sibelia" depends on...1294 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
...files. Then download the output files to you computer using scp and look at the png file that was produced. Does the kmer content look good to you? How much of the km...1346 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
...ok before we proceed! The command reapr facheck <assembly.fasta> will tell you if everything’s ok! in this case, no output is good output, since the only outp...1346 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
#To install perl modules perl -MCPAN -e shell # go to CPAN install modeinstall Bundle::CPAN # update CPANreload cpaninstall Set::Scalar1391 days ago