Results for "Hidden Markov Models"
Blogs
How to Prepare your Bioinformatics CV ?
Preparing a CV is also an art as well as a requirement for a person applying for a jo...s in training has been published.3 It is perhaps surprising to note that these models differ significantly from one...3369 days ago
- There any many of the documents have been developed and te...: *OnePageR - *R A Template for Building Models: *OnePageR - *R...etworks (R) NNet (R) Model Delivery Evaluating Models: *OnePageR - *R Ev...
3260 days ago
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Bookmarks
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We have evalu...ols are based on data generated from a specific sequencing technology, the models proposed in DAVI are generic...1142 days ago
International Conference on Bioinformatics Models, Methods and Algorithms
The purpose of the International Conference on Bioinformatics Models, Methods and Algorithms is to bring together researchers and practitioners interested in the application of computational systems...3496 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helica...ane-spanning proteins. It is based on a first order Markov model (MM) with an architectu.... The closed association between the biological and Markov...3941 days ago
Pages
Bio++ : C Language libraries for your biological need
...re as follows: Support for codon models (including non-homogenous models),Tools for manipulating Hidden Markov Models,Improved numerical too...value computations. Substitution models JC, K80, T92, F84, HKY85, TN...pulation genomics: the coalescent hidden Markov model approach. Genetics. 200...3944 days ago
Find certain files/documents in Linux OS
As bioinformatician I know the fact that we usually handle the large dataset and lost in the huge numbers of...ty directories under certain path.# find /tmp -type d -empty21. File all Hidden FilesTo find all hidden...3677 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequencing...he next step after reading genetic code is writing a script to analyse and explore the hidden...
3944 days ago
- ...sequence alignments are useful for building sequence profiles or Hidden Markov Models to perform more sensitive hom...condary structure can be predicted with an accuracy above 70 %. 3D models can be obtained most easily i...
3943 days ago
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Wire posts
News
- DST-SERB Winter School on Computational Chemistry (WSCC – 2013)December...er–Plesset perturbation theory; Coupled Cluster theory; Solvation Models; Continuum Solvation Models.[Dr. C. H. Suresh, CSIR- NIIS...
3825 days ago
Conserved Domain Database (CDD) version 3.11 released
National Center for Biotechnology Information (NCBI) Conse...new or updated NCBI-curated and 49,641 total domain models. The new version now contains...core matrices (PSSMs) have been recomputed for many models in CDD, and frequency tables...3723 days ago
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Opportunity posts
System Biologist at Millennium Software productions India Private Limited
Millennium Software productions India Private Limited www.cytosolve.com Post -...Biologist Job Description: Role of system biology is to design quantitative models of bimolecular networks and t...3925 days ago
- M.Sc. in Bioinformatics/ Life Sciences with 55% marks for Gen. & OBC and 50% mark...participate and contribute to the development and application of computational models for the design and discovery...
3836 days ago
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ResearchLabs posts
- ...ncer genomes Next Generation sequencing in malaria Computational comparative genomics Sensitive genomic sequence search techniques using hidden Markov models Tasmanian devil facial tumou...
3944 days ago
- Statistical functional genomics in experimental medicine The genome projects and the...rchers from mathematical and biological backgrounds. Research Area: Linear models for microarray data Digital...
3944 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Mun...r Ligand jo dock karega. Alignment to hona hi tha. Mera sequence mera base. Markov...3915 days ago
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet, Shar...t goals, seek (friends, family, anyone); do*not*die (like this)if sin abounds; keys (hidden...3914 days ago
Video
BBC Secret Universe: The Hidden Life of the Cell
This will help you to understand how a cell works (C) BBC MMXII3873 days ago
The human microbiome and what we do to it
Did you know that you and I are only 1% human — we've 90 trillion cells which don't bel...has a name — it's called our microbiome. But we're doing dreadful things to this hidden...3852 days ago
Bio-Scripts
A multilayer perceptron (MLP) neural network in Perl
#!/usr/local/bin/perl -w ##################################################...############################## #Tanh hidden neurons #Linear output neuro...s ######### my $numEpochs = 500; my $numHidden...y @trainOutput; # the outputs of the hidden...2912 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinst...heir counts and the output of DetermineGermlineContigPloidy ModelSegments (BETA Tool) Models segmented copy ratios from de...
2071 days ago
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Groups
INTIMATE secrets hidden in your DNA could be stolen without you even realising. By taking a glass from which you have drunk, a "genome hacker" could obtain a comprehens...3949 days ago
Our research interest falls in the broad field of bioinformatics and, more specifical...usion Functional association from array CGH data Probabilistic graphical models Gibbs sampling for motif f...3939 days ago
Tags
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG island, where "p" simply indicates that "C" and "G"...Tags: Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration, Bioinformatics, Computational Biology, CpG island
3821 days ago
Comments
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
... Mixed Effects Models Yes Ye... Limited Markov Chain Monte Carlo ...p; Markov Chains Yes &...p; Hidden Markov Models Yes Ye...3548 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Implementing Hidden Markov Models(HMM) for Information Extraction in Perl http://www.lwebzem.com/cgi-bin/res/HMM.html3813 days ago
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