Results for "Method"
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...ician) using both manual and CPAN method.When a Perl module is not ins...perl5/site_perl/5.10.0 .) Manual Method of Perl Module Installation...noying task. I recommend the CPAN method of installation as shown belo...You can use one of the following method to install a Perl module usin...3942 days ago
- ...ig.sub .$ cp /usr/share/libtool/config/config.guess .Configure libjpeg as follows. Note that this was installed on a 64 bit machine. However, this method may configure it in a 32 bit...
3932 days ago
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Bookmarks
Now time is come to revolutionize amino acid sequencing by Nanopore technology
Amino acid sequencing by Nanopore recognition tunneling method3673 days ago
- ...sembly for Illumina Data Protocol for a more generic description of the method. Protocol De novo Genom...Seq Protocol ChIP-Seq In this protocol we discuss ChIP-Seq: a method to analyze the interaction be...
3645 days ago
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Pages
Bio++ : C Language libraries for your biological need
...k files, with support for multiple entries. Phylogenetic reconstuction methods Parsimony (NNI)Distance matrices estimation and I/O to files in Phylip format.Distance methods: (U/W)PGMA, NJ, BioNJ.Maximu...3939 days ago
Genome Assembly Tools and Software - PART2 !!
...n from Ion Torrent RNA-Seq dataMaLTA is a method for simultaneous transcriptom...ySAM and SAMMate. assemblySAM employs a novel method to localize and assemble RNA-...ovel viral assembling and frequency estimation methods. This software uses a simple...2677 days ago
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Top-level pages
- ...ch in bioinformatics includes method development for storage, retr...often such that a statistical method, and hence computation, is ne...ude of different programs and methods. The protein sequences are...h the FASTA3 program package. Methods Mol. Biol. 132:185–219...
3939 days ago
- ...related subjects, an algorithm is an effective method for solving a problem using a...rroès (1126-1198) was using algorithmic methods for calculations.Adelard de...dly until a certain condition matches. It is a method common to functional programm...
3938 days ago
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Wire posts
News
- -Nature Publishing Group selected single-cell sequencing as Method of the Year for 2013. ->100 peer-reviewed single-cell publications based on Fluidigm technology Source: ht...
3768 days ago
Atlas of ancient inter-ethnic group !!!
...sing the recent advance technologies researchers have created a historical atlas of instances of such mixing. They use a sophisticated statistical method for making inferences about h...3725 days ago
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Opportunity posts
- ...ge. The aim of this project is to develop and implement a probabilistic method to infer the structure of pro...istic models of protein structure developed by the Hamelryck group. The method will also take the dynamic na...
3606 days ago
Senior Bioinformatics Scientist @ Strand Life Sciences -- Bangalore, India
...nd a strong eye for detail. The candidate will be able to contribute to impactful work spanning patient care, clinical research, and new assay and method development. REQUIREMENTS A...1942 days ago
ResearchLabs posts
- DbBrowser: Attwood Lab research concerns protein sequence analysis, primarily using the method of protein 'fingerprinting'. DbBrowser: Attwood Lab maintain a diagnostic fingerprint da...
3844 days ago
Computational Structural Biology Lab IITKGP
...ids interaction database server and bioinformatics web service. Understanding protein and RNA folding phenomenon and development of computational method for structure prediction. Dy...3222 days ago
Fun
Golden Rules of Bioinformatics
...es wrong, it will probably look right. Any simple problem can be insoluble if enough metting are held to discuss it. :P Stastics is a systematic method of comming to the wrong concl...3908 days ago
Video
Bioinformatics -- Understanding of living systems through information science
...t just humans, but monkeys, chimpanzees, bacteria, and so on. The first method used to analyze a genome is c...the genome is decoded bit by bit, using computers. By contrast, in our method, we've developed software cal...3909 days ago
- ...tal contributions to modern genetics include the development of genetic methods for understanding biological...and bacterial genes. In 1980, Botstein and three colleagues proposed a method for mapping human genes that...
3865 days ago
Bio-Scripts
Calculate some statistics for a DNA alignment with Perl
...'t/data/insulin.water'); my $aln = $alignin->next_aln; my $jcmatrix = $stats->distance(-align => $aln, -method => 'Jukes-Cantor'); prin...2641 days ago
Genetic Algorithms demonstration with word DNA in Perl
...note we do operations on BYTES, not BITS. This is because bytes # are the unit of information (and preserving them is the faster # breeding method) foreach my $byte (1 .. $d...2364 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...y using similar approaches. Thus, the employed method has to be unique for the targ...at aims for the development of a computational method to design inhibitors for prok...there is already a massive need for effective methods to eliminate the manipulated...2354 days ago
Groups
BioInformatics National Certification (BINC)
...are involved in imparting courses in Bioinformatics in India. However, there exists a large variation in the course contents, training period and method of training. Department of Bi...3914 days ago
Single molecule Sequencing (SMS)
...place in sequencing world, more and more scientists now keen to use SMS method to sequence molecules in comp...o share articles, development and application arise from arrival of SMS method. for instance, http://www.g...3219 days ago
Tags
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
A new approach to rapid, genome-wide identification and ranking of horizontal transfer candidate proteins is presented. The method is quantitative, reproducible, and computationally undemanding. It can be combined with genomic signature and/or phylogenetic tree-building procedures to improve accu...Tags: DarkHorse, method, genome-wide, prediction, horizontal, gene, transfer, HGT
2501 days ago
- Tallymer is based on enhanced suffix arrays. This gives a much larger flexibility concerning the choice of the k-mer size. Tallymer can process large data sizes of several billion bases. We used it in a variety of applications to study the genomes of maize and other plant species. In particu...
Tags: Tallymer, method, compute, K-mer, frequencies, application, annotate, large, repetitive, plant, genomes
2263 days ago
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Comments
Comment on "Tools for Differential expression analysis"
...tribution to model the count data and provides methods for estimating variance and...ear model to model the count data and provides methods for estimating dispersion an...to model the gene expression data and provides methods for estimating variance and...413 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1236 days ago
- +8 more Comments
