Results for "RNA structure"
Blogs
List of gene ontology software and tools
...fundamental distinctions about GO structures, GO annotations, and w...article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003343 Following are...enes, visual browsing of GO graph structure, interactive visualisation of...with two other tools, namely External to GO Query and GO Archive Query,...3707 days ago
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how i...n T-regulatory and T-helper cells. Learn how the gene expression profiles from RNA-Seq a...3194 days ago
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Bookmarks
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NG...ration sequencing http://hmg.oxfordjournals.org/content/19/R2/R227.full...GS data http://bioinformatics.oxfordjournals.org/cgi/content/abstract/28...hool/course-schedule/ngsmetagenomics/ RNASeq:ht...3484 days ago
RNA Sequencing Helps Identify Functional Variants from GWAS
For Alzheimer’s and other complex disorders, mining the genome for disease-associated variants is...te to disease. As reported last month in Nature and its associated journals, advances in high-throughput RNA seque...3813 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha...tials that can be used for automatic prediction of trans-membrane (TM) protein structure. While algorithm for identifi...3942 days ago
- Liver cancer is third leading cause of deaths and fourth most frequent occuring cancer worldwide. There ar...ut new therapeutic target. One way is to look the relationships between mRNA, methylation and miRNA data...
3558 days ago
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Discussion topics
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and...e platform technology uses nanopores to analyse single molecules including DNA/RNA and p...3810 days ago
Pages
Bio++ : C Language libraries for your biological need
...nalysis Sequence and Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any 'Word'...t (Bowker's test).etc. Phylogenetics and molecular evolution Data structure and IO Phylogenetic trees.IO...3945 days ago
- ...pe" An editorial from the journal BIOINFORMATICS-Bioinformatic..., currently Glycoscience, Protein Structure. LASSAP a LArge Scale...rk , Oct. 24, 2002. The international 'HapMap' project cbsnews...cal Guide to protein sequence and structure analysis at UCL Feel...
3918 days ago
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Top-level pages
- ...tion of a protein. Protein 3D structures are stored in specific datab...classification with 70S, 30S RNAs established the separate kingdom o...tion. The increased speed of structure determination necessary for t...2:185–219The Genome International Sequencing Consortium (2001)...
3944 days ago
Phylogenetic for Bioinformatics
...ough time.Every living organism contains DNA, RNA, and proteins. Closely relate...e a high degree of agreement in the molecular structure of these substances, while th...sible to isolate and identify these molecular structures. phylogenetics is the s...3943 days ago
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Wire posts
News
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Confe...the latest developments in understanding chromatin structure and function, particularly ge...he leading researchers in chromatin and chromosome structure, epigenetic gene regulation a...3922 days ago
RNA-Seq Data Pathway and Gene-set Analysis Workflows
It describe the GAGE (Luo et al., 2009) /Pahview (Luo and Brouwer, 2013) workflows on RNA-Seq data pathway analysis and...ncludes a new tutorial, “RNA-Seq Data Pathway and Gene-set...nalysis using one of the major RNA-Seq analysis tools, DEseq/DEs...ial. Although we focus on RNA-Seq d...3830 days ago
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Opportunity posts
Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers University of Technology a...quencing, in particular comparative metagenomics and gene expression analysis (RNA-seq)....3945 days ago
Senior Bioinformatics Programmer and SRF at BIOTECH PARK Lucknow
BIOTECH PARK Advt. No. 3 (8)/BP/13 A walk-in-interview will be held in the B..., DBMS/RDBMS and HTML. Experience in various domains of bioinformatics such as structure based drug designing, Newtoni...3905 days ago
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ResearchLabs posts
- Responsible (a) for developing Chemgenome, Bhageerath...softwares for genome annotation, protein tertiary structure prediction & computer aid...). Research Interest Genome Analysis, Protein Structure Prediction and Drug Design....
3945 days ago
- This research group brings the tools of systems biology to bear on the grand chall...earch efforts are the culmination of three directions: (1) Understanding the structure and logic of central carbon a...
3905 days ago
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Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like...r Proteomics Koi Khel Nahi Jish Desh Mein Day Hoff Rehta Hai PDB Ek Numbari Structure Dus Numbari GCG Karo Sajana...3916 days ago
Video
The Story of You: ENCODE and the human genome
Ever since a monk called Mendel started breeding pea plants we've been learning about our genomes. In 1953, Watson, Crick and Franklin described the structure of the molecule that makes up...3904 days ago
'What is Life? A 21st Century Perspective' by Dr Craig Venter
One of the landmark events of 20th century science was...the Irish event that inspired the discovery of the structure of DNA. In February, 1943 o...editary information could be encoded in a chemical structure (aperiodic crystal) in living...3902 days ago
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Bio-Scripts
- #!/usr/bin/perl use strict; use warnings; my $DNA = "GATTACACAT"; #transcribe DNA to RNA - T changes to U my $RNA = $DN...
2914 days ago
Perl script introduces control structures, arrays and hashes.
#!/usr/bin/env perl use strict; use warnings; my @first_array = ('DNA', 'ATGCGTGC', 5, 'RNA', 'AUGC'); print $first_arra...for (my $i=0; $i 'ATCGATGCT', 'RNA' => '...2859 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...ithin the scope of the project. The molecular structures involved in the develo...another pipeline for prokaryotic TCS protein structure prediction and inhibitor desi...hods or totally new methods that offer an alternative solution to various biological...2359 days ago
Tags
- ne PhD position is available at the Bioinformatics Center, Department of Biology, University of Copenhagen, Denmark. The PhD position concerns protein structure prediction, and will be in the Structural Bioinformatics group of Associate professor Thomas Hamelryck. The group is an integrated part ...
Tags: protein, structure prediction, RNA structure, Bayesian algorithm
3611 days ago
Comments
Comment on "Running Trinity on RNA-seq !"
...logy of your organism based on your assembled transcripts and the input RNA-Seq data. Such studies might...ed genome, consider using the Trinity transcriptome assemblies for gene structure annotation using PASA....2120 days ago
- ...a run. mRIN mRIN - Assessing mRNA integrity directly from RNA-Seq data. MultiQC Multi...to be written around the data collected. RNA-SeQC RNA-SeQCis a tool w...C bias, read distribution over the genome structure and coverage uniformity. The...
2134 days ago
