3068 days ago
Basic command-line to run BLAST
...1.protein.faa This gives us a lot of information on the terminal screen. But this is difficult to sav...scroll through slowly blastp -help | less To quit the less screen, press the q key. Parameters...2243 days ago
710 days ago
Fancy Oneliner for Bioinformatics !!
...ic analyses. You can click on the following links to browse through different topics. You can copy/paste the commands as they are in your terminal screen, provided you follow the same...2858 days ago
2650 days ago
Linux SSH Client Commands for Bioinformatics
...ii. To come back to the localhost temporarily, type the escape character ~ and Control-Z. When you type ~ you will not see that immediately on the screen until you press and press ent...3704 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
...), but following are the ones I use the most. Screen is like a window manager for...o protects you from disconnection, because the screen session doesn’t end whe...ing session, or create a new one if none existsscreen -D -rTo create a new window i...3702 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...pooling strategy with barcoding to allow use of Illumina sequencing to screen for retrotransposon insertion...e Bioinformatics Open Source Conference in Boston, July 2010 A screencast that provides a step-by-s...3778 days ago
List of In-silico Binding Site Prediction Tools
...s, and sequence conservation, are available to screen and sort clusters of residues...prediction/protein functional inference/ligand screening algorithm that detects com...bil.ibcp.fr/cgi-bin/sumo-welcome allows you to screen the Protein Data Bank (PDB) f...3743 days ago
Update Genome Workbench 2.7.15 released
NCBI Genome Workbench is an integrated application for viewing and analyzing sequence data. With Genome Workbench, you can view data in publically available sequence da...3719 days ago
Find predicted CRISPR sites using Ensembl
Did you know that you can now use Ensembl to help design your CRISPR experiments? Just turn on the brand new track that shows you the CRISPR sites that have been predic...2838 days ago
Bioinformatics @ TATA MEMORIAL CENTRE, NAVI MUMBAI
..., RESEARCH AND EDUCATION IN CANCER KHARGHAR, NAVI MUMBAI – 410210 No. ACTREC/Advt./ 72 /2013 WALK IN INTERVIEW 1. JRF* Genome-wide RNAi screen with human pooled tyrosine ki...3841 days ago
Summer internship positions at DuPont
...me systems. · New tools for microbial strain and genome engineering using state-of-the-art methodologies. · Rapid high throughput assays to screen microorganisms from various...2915 days ago
The Ontario Institute for Cancer Research (OICR) Genomics Lab , Toronto, Canada.
...enome Project led to the development of a wide array of technologies to screen the genome and its products (...acilities that use robotics and informatics to generate high-throughput screens of DNA, RNA, protein, tissue...3918 days ago
What Is Personalized Medicine?
Gene Screen BC 2011 Participant. The goal of this short film is to introduce the audience to the emerging field of personalized cancer treatment. The story is loosely ba...3705 days ago
2074 days ago
Run multiple bash command in screen !
#login to screen screen -r 123 #bash.sh srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash.sh #Run and check the status in screen contol +A +D961 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
As a Bioinformatician/ Computational biologist we swim in the ocean of genomic/proteomics data, and play with them with an ease. In our day to day simulation, analysis, comparative study we do need to run exhaustive programs, which might take more than a week. In such cases we do need to disconne...Tags: Bioinformatics, Computational Biology, Linux, SSH, Session, Disconnect, Running, Screen, Example
3702 days ago
Comment on "Coronavirus Resources !"
UK resource in CoViD19 http://cov-glue.cvr.gla.ac.uk/#/home https://macman123.shinyapps.io/ugi-scov2-alignment-screen/1458 days ago
1519 days ago