Results for "Sequence analysis."
Users
Skills: Sequence analysis.2813 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependencies....ython support for the BioSQL database schemalibbtlib-perl - library for basic sequence...3947 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatici...3947 days ago
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Bookmarks
- I bet, this website will be your best friend in near future. This helps us to explore the existing open source codes and learn from it. You can find some useful open so...
3913 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Documents on using R for data mining are available to download for non-commercial personal...3913 days ago
- +424 more Bookmarks
Files
- Bioinformatician life is interconnected, they always dream for a powerful server, little more space on server as they are generating lots of data per run, dream to publish results in good impact journals, meetings reminders :) and research analysis off course!!!
3907 days ago
Detect the sequence pattern and its location in fasta file with match and mismatches information.
This script is one of my old script to detect some centromeric pattern in chromosomes. User can also control the number of mismatches allowed through command line .. To run: perl centro.pl3865 days ago
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Discussion topics
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and miniaturised MinION™ device. These are a new gener...3810 days ago
- The key to finding a solution is to notice that most genomicsequences differ by very little. It may...t the number of complete genome sequences being stored is increasing r...l. In other words, a single DNA sequence isn't particularly compressib...s/181-algorithms/4537-a-new-dna-sequence-...
3917 days ago
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Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down -...raries for Bioinformatics, including sequence analysis,phylogenetics, molec...ures of the libraries are as follows:Sequence analysis Sequence and Site o...Boussau B. Non-homogeneous models of sequence...3945 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an integra...3945 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted in...n new biologically suitable language to handle ever growing genome or protein sequences...
3945 days ago
- ...to provide raw data for later analysis. Once the raw data are availa...les based on word–usage analysis. Text recognition systems are...tein interactions. Analysing sequence data: The primary data of seq...The SWISS–PROT protein sequence database and its supplement Tr...
3944 days ago
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Wire posts
News
100K Foodborne Pathogen Genome Project
The 100K Genome Project, led by the University of California, Davis, the U.S. Food and D...unced that it has added 20 newly completed genome sequences of foodborne disease-causing...nology Information. 100K Genome Project, aims to sequence...3920 days ago
Prime Minister’s 100k Genome Project
Genomics Ebgland is destined to sequence 100,000 patients over the next five year in England. A landmark project by british government. Genomics England will play...3920 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...g a bioinformatician to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flagship...ity of agroecosystems it will be critical to establish a link between sequence variation, functional variatio...3946 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowledge on the basic components making up living systems. An ever growing number of...
3946 days ago
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ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our long-term research objective is to understand microtubule organization in living cell...
3946 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical genetics, bioinformatics and population genetics. Her main area of research is linkage mappi...
3945 days ago
- +54 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will b...ga. Alignment to hona hi tha. Mera sequence mera base. Markov aapke hai...mil gaya. BLASTana FASTAna. Hamari Sequence aapke pass hai. BLAST To Hon...GeneScan Karke Dekho Alignment Apna Sequence...3916 days ago
Video
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3905 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data A...will soon outstrip advances in computing power to perform current methods of analysis. Extracting new science from t...3899 days ago
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Bio-Scripts
R script to visualize fastANI core-genome comparison
####### # Purpose: Visualize fastANI core-genome comparison # Usage: Rscript # Output: .pdf # Uses genoPlotR package: http://genoplotr.r-forge.r-project.org...1098 days ago
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG use Bio::SeqIO; $inFile = "BRCA2.fa"; $in = Bio::SeqIO->...2913 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a progr...basically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Whi...3528 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3524 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Center. His research interest...2359 days ago
Groups
R is a free software programming language and a software environment for statistical c...ng statisticians and data miners for developing statistical software and data analysis. R's popularity has increased...3948 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of th...3904 days ago
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Tags
- I am a good Bioinformatic guy, Having good knowledge of Life science domine with nice programming skill. I always thinking and looking for new ideas.
Skills: Perl, Python, Biopython, C+, C++, Drug designing, System biology approach, Sequence analysis.
2813 days ago
Comments
Comment on "Tools for Sequence translation !"
Sequence translation is the process of converting a DNA or RNA sequence into its corresponding protein sequence. This is an important step in...interface for performing the analysis. These are just a few ex...the many tools available for sequence translation. The choice of too...418 days ago
Comment on "Tools for RNA classification"
There are several tools available for RNA classificatio...r identifying non-coding RNA (ncRNA) sequences. Rfam: Rfam is a databa...hine (SVM) algorithm to classify RNA sequences. It is particularly useful f...ination of HMM-based and comparative sequence...418 days ago
- +11 more Comments
