List of bioinformatics packages for NGS analysis !
Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software. Bioconductor &nd...1135 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic material, DNA, to two daughters’ cells. Du...e same chromosome. During recombination, the precise breakage of each strand, exchange between the str...3546 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. W...ology, the models proposed in DAVI are generic and can be used across different NGS technologies as well as acros...1139 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedici...Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/ You can also ad...0.1093/bioinformatics/btr441 ngs_backbone: a pipeline for read...ic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://w...3480 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take...e reads into haplotypes. GAM-NGS 1.1b – Genome Assemblie...uction Using Incremental HashingStringGraph is a novel, ha...contig sequences (FASTA) and NGS paired-read data (FASTA or FA...reads Filtering and ScaffoldingSLIQ , a set of simple lin...2679 days ago
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter...R-1035955. Any opinions, findings, and conclusions or recommend...azon-MWS - Perl API bindings to Amazon Marketplace Web Ser...;- version agnostic Perl bindings for zeromq avar/sendmail-pmi...e-MtGox - MtGox API bindings for Perl masartz/p5-webservi...2487 days ago
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Bioinformatics Companies in India
Following are the list of top 30 bioinformatics companies in India. The companies name o...Basavanagudi, Bangalore-56004.www.siritech.com 26. Strand Life Sciences Pvt. Ltd.#237,...Avenue, Raj Mahal Vilas, Bangalore 560 080 INDIAwww.str...3918 days ago
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
This course is open to all students and postdocs and registration for all academic participants is free of charge. To help us in organizing the course, please registe...3912 days ago
Tivicay® (dolutegravir) 50-mg tablets for HIV-1
FDA has approved Viiv Healthcare’s integrase inhibitor Tivicay® (dolutegravir) 50-mg tablets, for use with...t-naive and treatment-experienced, including those treated with other integrase str...3908 days ago
NGS & Bioinformatics Summit Europe
NGS & Bioinformatics Summit Europe Conference...rmany Website: https://www.gtcbio.com/conference/ngseurope-overview Contact pers...isten Starkey We welcome you to join us at GTC’s NGS & Bioinformatics Summit E...3942 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Clim...informatician to analyze Next Generation Sequencing (NGS) data analysis. In the contex...which has computational facilities and expertise in NGS data analysis, and will benef...3942 days ago
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Create genome scaffolding with Perl
#!/usr/bin/perl use warnings; use strict; use English; use Pod::Usage; ## u...eq) = ($lSeq, $sSeq); } my $doRC = ($strand eq "-"); if($doRC){...) { # target sequence is assumed to be forward strand $lSeq = rc($l...2301 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or software. I basica...3524 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3519 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pu...3900 days ago
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Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how integrated multi-omics functionality in Strand NGS was used to find the regulatory role of FoxP3 in T-regulatory and T-helper cells. Learn how the gene expression profiles from RNA-Seq a...Tags: RNA-Seq, ChIP-Seq, Strand NGS, regulatory cells, T-cells
3190 days ago
Integrated mRNA and microRNA transcriptome analysis in Strand NGS
Using a nasopharyngeal carcinoma case study, this paper highlights the integrated transcriptome analysis capabilities of Strand NGS demonstrating the identification of miRNA – mRNA interactions in regulatory networks.Read the application note on Integrated mRNA and microRNA transcripto...Tags: mRNA, miRNA, transcriptome, NGS data analysis, next generation sequencing, Strand NGS
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