Results for "Tk"
Users
3519 days ago
2968 days ago
Blogs
List of Research Institutes in India (Biological Sciences/ Biotechnology)
...aromatic, medicinal and other economic plants. Utkal UniversityVani Vihar, Bhubaneswar 751 004, OrissaWeb: www.utkaluniversity.org/CHANDIGARH In..., Srinagar - 191121 Jammu and KashmirEmail: skuastkashmir@gmail.comWeb: http://ww...2358 days ago
Installing Bandage on Ubunty !
...10n x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev x11proto-xext-dev x11proto-xf86vidmode-devSuggested packages:libqt5libqgtk2 qt5-image-formats-plugins qt...2183 days ago
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Bookmarks
- ...5.16Supported Operating Systems MS Windows XP and later 32 and 64 bit. Linux 32 and 64 bit - minimum glibc 2.5, GTK+ 2.10, libstdc++6. ...
3911 days ago
Next Generation Sequencing (NGS) Tutorials
...tion sequencing data. http://www.ncbi.nlm.nih.gov/pubmed/23657089 GATK: a Toolkit for Genome Analysis http://www.broadinstitute.org/gatk/ Metagenomics:http://www.nbi...3481 days ago
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Pages
Linux SSH Client Commands for Bioinformatics
...display the host key not found message and you can give “yes” to continue. The host key of the remote host will be added under .ssh2/hostkeys directory of your home dir...3700 days ago
Genome Assembly Tools and Software - PART2 !!
...d assembler for assembling antigenic variant sequences in bacteria. VelvetK 20120606 – Find a reasonable K-mer size to Assemble Genome Reads with VelvetVelvetK can estimate the best k-...2680 days ago
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Top-level pages
- ...ogy goes back to the 1920s when scientists were already thinking of establishing biological laws solely from data analysis by induction (e.g. A.J. Lotka, Elements of Physical Biolog...
3941 days ago
- .../ga.html•http://kal-el.ugr.es/gags.html•http://kal-el.ugr.es/~jmerelo/GAJS.html•http://www.genetic-programming.org/•http://www.iitk.ac.in/kangal/deb_tut.shtml
3940 days ago
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Wire posts
News
- ...orrelation; Electron density; Examples and problems.[Prof. S. R. Gadre, IITK, Kanpur]4. Hückel...sical and ab initio molecular dynamics; Applications.[Dr. Nisanth Nair, IITK, Kanpur]More Info : https://s...
3823 days ago
- ...next generation sequencing data sets. Scalpel, which is open source and available for download on SourceForge, outperformed the popular tools GATK HaplotypeCaller and SOAPindel...
3540 days ago
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Opportunity posts
- ...Application Fee Demand Draft for Rs.50/- (Not for female candidates) drawn in favour of IIT Kharagpur payable at Kharagpur Advertisement: www.iitkgp.ac.in/topfiles/sric_job_det...
3425 days ago
- ..."Structural and functional characterization of serine biosynthetic pathway enzymes from entamoeba histolytica". It is good chance to get job with IITKGP and brighten your future. L...
3287 days ago
- +1 more Opportunity posts
ResearchLabs posts
Computational Structural Biology Lab IITKGP
...orithms for miRNA and traget prediction. Homepage: http://www.facweb.iitkgp.ernet.in/~rbahadur/prince/home.html?home Alternate : http://www.csb.iitkgp.ernet.in/ Facebook: https:...3224 days ago
- ...cture. We use high- throughput genomic methods as well as classical genetics to achieve these aims. More at http://faculty.iisertvm.ac.in/~nishantkt/index.html
2975 days ago
Bio-Scripts
Extract ids from file with perl
#!/usr/bin/perl use strict; use warnings; my $fh=read_fh("fin.txt"); my %idHash; my $lastKey; while () { chomp $_; my @cells = split /\t/, $_; $idHash{$cells[0]}=$....2602 days ago
Plot custom gene density with R
library(karyoploteR) pp2244 days ago
- +37 more Bio-Scripts
Tags
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline for identifying genomic features (i.e., protein-encoding genes and RNA) and annotating their functions. Recently...Tags: Bioinformatics, NGS, Tk, Pipeline, Annotation, Tool, RASTtk
2924 days ago
Comments
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
IEEE Transactions on Knowledge and Data Engineering accepts bioinformatics and algorithms manuscripts https://www.computer.org/csdl/journal/tk1264 days ago
Comment on "Sibelia: A comparative genomics tool"
...aph is generated for K = min(Kn, MinimumBlockSize) or for value of "--lastk" cmd parameter if it is set,...sed for the last stage. You can override this value by setting the "--lastk" parameter: --lastk <...1279 days ago
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