1562 days ago
chromosight: Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps
Python package to detect chromatin loops (and other patterns) in Hi-C contact maps. Stable version with pip: pip3 install --user chromosight Stable version with conda:...1517 days ago
1409 days ago
ShadowCaster: a hybrid approach for the detection of horizontal gene transfer events in prokaryotes
...calculate Bayesian likelihoods for each ‘alien genes’ with an unusual sequence composition according to the host genome background to detect HGT events in prokaryotes. h...1404 days ago
vsFilt: A tool to improve virtual screening by structural filtration of docking poses
...Filt is the first open application for post-docking structural filtration, available as a web-server. The new tool is easy to use and configure to detect a wide range of interaction t...1270 days ago
PaReBrick: PArallel REarrangements and BReaks identification toolkit
...ides diagrams of the neighbors for each block of interest, allowing the detection of horizontally transferre...d PaReBrick’s efficiency and accuracy and showed its potential to detect genome rearrangements respons...953 days ago
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