BOL: All Site Activity

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- Jit@jit.aber
Jit posted a new ad in the ResearchLabs Troyanskaya Lab 1754 days ago
- Jit@jit.aber
Jit posted a new ad in the ResearchLabs Liu Lab 1754 days ago
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script Install NPM ! 1755 days ago
- Rahul Nayak@rahul
Rahul Nayak posted to the wire 1755 days ago

#Nanopore GPU #basecalling using# GUPPY on #UBUNTU 18.04 and @nvidia docker v2 with a RTX 2080 @kepler_00/nanopore-gpu-basecalling-using-guppy-on-ubuntu-18-04-and-nvidia-docker-v2-w" rel="nofollow">https://medium.com/@kepler_00/nanopore-gpu-basecalling-using-guppy-on-ubuntu-18-04-and-nvidia-docker-v2-w
- Rahul Nayak@rahul
Rahul Nayak created a new bio-script CUDA Toolkit 10.2 Download 1755 days ago
- Jit@jit.aber
Jit bookmarked Nanopore adaptor ! 1756 days ago

Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads....

https://github.com/rrwick/Porechop/blob/master/porechop/adapters.py
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore 1756 days ago

wget https://github.com/philres/ngmlr/releases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gz--2020-02-03 11:05:58-- https://github.com/philres/ngmlr/releases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gzResolving github.com (github.com)......
- Rahul Nayak@rahul
Rahul Nayak posted a new ad in the Opportunity INRAE organises open competitions to recruit research scientists on permanent positions. 1756 days ago
- BioStar@biostar
BioStar bookmarked DMINDA2: an integrated web server for DNA motif identification and analyses 1756 days ago

DMINDA (DNA motif identification and analyses) is an integrated web server for DNA motif identification and analyses More at http://bmbl.sdstate.edu/DMINDA2/ https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086085/

http://bmbl.sdstate.edu/DMINDA2/
- Jit@jit.aber
Jit bookmarked alien_index : identify potential contaminants or horizontally transferred genes in transcriptomes. 1756 days ago

identify potential contaminants or horizontally transferred genes in transcriptomes. algorithm is based on alogorithm described in the following: Gladyshev, Eugene A., Matthew Meselson, and Irina R. Arkhipova. "Massive horizontal gene transfer in...

https://github.com/josephryan/alien_index
- Jit@jit.aber
Jit posted to the wire 1756 days ago

#Improving draft #assemblies by iterative mapping and #assembly of short reads to eliminate #gaps https://genomebiology.biomedcentral.com/articles/10.1186/gb-2010-11-4-r41
- Jit@jit.aber
Jit posted to the wire 1756 days ago

Nanopore read error correction challenge https://albertsenlab.org/can-you-beat-our-nanopore-read-error-correction-we-hope-so/ #Nanopore #Read #Correction
- Jit@jit.aber
Jit bookmarked 3D de novo assembly (3D DNA) pipeline 1756 days ago

For a detailed description of the pipeline and how it integrates with other tools designed by the Aiden Lab see Genome Assembly Cookbook on http://aidenlab.org/assembly. For the original version of the pipeline and to reproduce the...

https://github.com/theaidenlab/3d-dna
- Jit@jit.aber
Jit posted to the wire 1756 days ago

#Evolution and Ecology of #Cancer Postdoctoral Research Scholar https://biodesign.asu.edu/contact/careers/evolution-and-ecology-cancer-postdoctoral-research-scholar
- Jit@jit.aber
Jit posted to the wire 1756 days ago

AB1 chromatograms used to validate the #ConTAMPR method for detecting DNA contamination https://data.mendeley.com/datasets/fsjpwrnv4t/1 #contampr #AutoConTAMPR
- Neel@neelam
Neel commented on a page titled Worldwide funding agencies to fund your bioinformatics research !! 1756 days ago

Try this https://www.birac.nic.in/big.php if you dream ur company https://www.uniraj.ac.in/uic/
- Neel@neelam
Neel posted to the wire 1756 days ago

Cancer poisson distribution https://www.r-bloggers.com/cancer-clusters-and-the-poisson-distributions/ #cancer #poisson
- Rahul Agarwal@raag
Rahul Agarwal posted to the wire 1756 days ago

Comparing Python, Go, and C++ on the N-Queens Problem-https://arxiv.org/pdf/2001.02491.pdf #python
- Rahul Agarwal@raag
Rahul Agarwal posted to the wire 1756 days ago

https://fossbytes.com/python-c-go-solve-n-queens-problem/ #numba #python #cpp
- Jit@jit.aber
Jit posted to the wire 1756 days ago

https://rakudo.org/downloads #Raku #Compiler #Rakudo

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