GFA (Graphical Fragment Assembly) is an emerging standard format for representing sequence graphs. Although it was originally conceived as a format for sequence assembly (hence the name), and this remains its core application, it is more general,...
The modelStudio package automates the explanation of machine learning predictive models. This package generates advanced interactive and animated model explanations in the form of a serverless HTML site.
It...
Trelliscope provides a way to flexibly visualize large, complex data in great detail from within the R statistical programming environment. Trelliscope is a component in the DeltaRho environment.
For those familiar with Trellis...
The Graphical Fragment Assembly (GFA) is a proposed format which allow to describe the product of sequence assembly. This gem implements the proposed specifications for the GFA format described under...
Written and maintained by Simon Gladman - Melbourne Bioinformatics (formerly VLSCI)
Protocol Overview / Introduction
In this protocol we discuss and outline the process of de novo assembly for small to medium sized...
Bioinformcs software are published by Genome Biology - Software section
https://genomebiology.biomedcentral.com/submission-guidelines/preparing-your-manuscript/software