BOL

We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in Ensembl, and identify hits to the genome, or to genes, with this tool.

Genome Workbench 2.10.7 is here! New features include added support for local custom BLAST databases and improvements to Tree View.

github.com - DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer...

We have made changes the nr version 5 database, (nr_v5), to facilitate better search results and improved performance by reducing the number of redundant titles in the nr_v5 database used by webBLAST, which is also available for BLAST+ users.

Max 3' match

Removing contaminated sequences using NCBI quality assurance tools

BLASTn output format 6 BLASTn maps DNA against DNA, for example gene sequences against a reference genomeblastn  -query genes.ffn  -subject genome.fna  -outfmt 6 BLASTn tabular output format 6 Column headers:qseqid sseqid pident...

REST API The Representational State Transfer (REST) sample clients are provided for a number of programming languages.

Perl GD module installation in various operating systems

How to download FASTA sequence for certain gene features while in the NCBI's Sequence Viewer. Sequence Viewer homepage: www.ncbi.nlm.nih.gov/projects/sviewer/ Sequence Viewer playlist: https://www.youtube.com/playlist?list=PL76D7EE6A6A8AC1C3