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wgd—simple command line tools for the analysis of ancient whole-genome duplications
By LEGE 1614 days agogithub.com - wgd is a easy to use command-line tool for KS distribution construction named wgd. The wgd suite provides commonly used KS and colinearity analysis workflows together with tools for modeling and visualization, rendering these...Breeding Insight
By BioStar 1446 days agowww.breedinginsight.org - Breeding Insight at Cornell University will leverage recent improvements in genomics and open source informatics components, and in partnership with small breeding programs, will enable these programs to harness powerful digital...Kmer: a suite of tools for DNA sequence analysis
By BioStar 1223 days agohelp.rc.ufl.edu - More at https://help.rc.ufl.edu/doc/Kmer This also includes: A2Amapper: ATAC, Assembly to Assembly Comparision tool: Comparative mapping between two genome assemblies (same species), or between two different genomes (cross...Upset plots !
By BioStar 639 days agojokergoo.github.io - Upset plots are a type of visualization used to analyze the intersection of sets or categories. They are particularly useful for displaying data with multiple categories and analyzing their overlaps. In an upset plot, each row represents a category...BioKit: a set of tools dedicated to bioinformatics, data visualisation
By Neel 188 days agobiokit.readthedocs.io - BioKit is a set of tools dedicated to bioinformatics, data visualisation (biokit.viz), access to online biological data (e.g. UniProt, NCBI thanks to bioservices). It also contains more advanced tools related to data analysis...Added video feature in BOL
By Jitendra Narayan 4149 days agoShare and watch your favourite bioinformatics training, lecture, tutorial video on BOLAn Introduction to Applied Bioinformatics
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The Department of Biostatistics and Bioinformatics at Duke University Medical Center is seeking a Postdoctoral Associate for a one year appointment to work on several high-dimensional research projects. The specific goals of the project are to...RNA-Seq Data Pathway and Gene-set Analysis Workflows
By Jit 4077 days agoDescribe the GAGE workflows on RNA-Seq data pathway analysis and gene-set analysis.
