Results for "Generate"
Users
About me: ...every 6 months we see new instrument with higher throughput like BGI’s DNBSEQ-T7 at 60 genomes per day. At the world’s rate of sequencing, we’ll generate 20 ExaBytes of data by 2025 –...672 days ago
Blogs
Five unique traits of effective computational biologist
...al keywords into a search engine or posting a question at Stack Overflow or the BioStars forums. I have entered problems into search engines that generate no results, and every questio...3963 days ago
The 5 reasons to mistakes at bioinformatics work !!!
...t all are interdependent and need proper configuration. I face the same kind of problem with Evolver :( … 4.Folders missing: The pipelines generate lots of data, and we keep the...2118 days ago
- +8 more Blogs
Bookmarks
- ...ng (whole cDNA sequencing, RNA-seq), digital gene expression sequencing (Tag-Seq), ChIP-Seq, and so on. And there are many sequencing platform to generate sequece, as well know Sanger/...
3246 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality. h...3233 days ago
- +57 more Bookmarks
Files
- ...e/Tools/OPERA-LG_v2.0.6/all_p_ctg.fa[Thu Jun 14 18:18:35 2018] Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14 18:58:37 2018] Generate alignments of reads using bwa...
2164 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...er and orient sequence scaffolds generated by NGS and assemblers into l...bler and variant caller that can generate high quality assemblies and v...g-based simulation. SIS – Generate Draft Genome Sequence Scaffol...ndalone package to assemble ESTs generated using Sanger and/or Roche-45...2698 days ago
Awesome perl frameworks, libraries and software - PART 2
...le. PerlGameDev/Box2D-perl - Box2D for perl Ovid/Corinna - Generate Perl classes from XML schemas...akt.tv dscho/dsstore - A remote-hg mirror of the Perl project to generate .DS_Store files (even on non-...2507 days ago
- +2 more Pages
Top-level pages
- ...methodologies, as well as data mining technologies. Unfortunately life is never simple. In molecular biology, it’s becoming more common to generate reams of data then ask someon...
3959 days ago
Most Commonly used Awk by Bioinformatician
...ading these apps into memory, and it's much faster to do it all with one. This is ideal for something like an openbox pipe menu where you want to generate something on the fly. You can...3925 days ago
- +16 more Top-level pages
Wire posts
News
An entire genome written in lab
...s up the possibility of turning re-coded bacteria into biofactories, capable of producing potent new forms of protein that could fight disease or generate sustainable materials. More...3857 days ago
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
...unrelenting computational power is required to decipher pieces of data generated through high throughput tech...rmation that will help to answer many mysteries of life. To be able to generate knowledge from the oceans of...3857 days ago
- +2 more News
Opportunity posts
- ...labs. The goal of this young computational systems biology group is to generate biological sense from the gro...are based on a combination of published data. An important part of the generated data that underlies this pro...
3961 days ago
MedGenome is looking for Genome Analysts
...e is looking for Genome Analysts (5-6 Positions), ambitious and energetic who will work both independently and as part of a collaborative team to generate data from various genomics-or...1232 days ago
- +7 more Opportunity posts
ResearchLabs posts
- ...in nutrients availability. The genome-wide responses studied with the "omics" techniques (transcriptomics, proteomics, metabolomics and genetics) generate a wealth of experimental data...
3932 days ago
The Ontario Institute for Cancer Research (OICR) Genomics Lab , Toronto, Canada.
...t with these products (chemicals, RNAi). The existence of these tools resulted in the creation of facilities that use robotics and informatics to generate high-throughput screens of DN...3932 days ago
- +1 more ResearchLabs posts
Fun
Introduction to programming. Write short programs that generate graphics and animation.
Introduction to programming. Write short programs that generate graphics and animation. http://funprogramming.org/3563 days ago
Video
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...is drawn from fragmented research literature generated by "siloed" reductionist bas...needed "tool" to tackle this challenge -- to generate the necessary evidence to sup...atory also developed methods and pipelines to generate and apply genome-wide genetic...3883 days ago
Bio-Scripts
Generating a random string with Perl
#!/usr/bin/perl # This function generates random strings of a given length sub generate_random_string { my $length_of...ength of # the random string to generate my @chars=('a'..'z','A'.....domstring) { # rand @chars will generate a random # number between...2919 days ago
Implementation of biological random mutation with Perl
#!/usr/bin/perl -w use strict; use warnings; #sequence for a better recognition my $DNA="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA \ n";...2914 days ago
- +10 more Bio-Scripts
Tags
Generate interactive codon usage plots
Generate interactive codon usage plots as used at ensembl.lepbase.org. The input file format can be generated from an Ensembl database using the export_json.pl script from the easy-import pipeline. live demoTags: Generate, interactive, codon, usage, plots
2270 days ago
dotPlotly: Generate an interactive dot plot from mummer or minimap alignments
Create an interactive dot plot from mummer output OR PAF format R script that makes a plotly interactive and/or static (png/pdf) dot plot. Shiny app available for testingTags: dotPlotly, Generate, interactive, dot, plot, mummer, minimap, alignments
1912 days ago
Comments
- ...another widely used short read simulator that generates synthetic reads based on the...mulator that uses a profile-based approach to generate synthetic reads. It can simul...im: dwgsim is a short read simulator that can generate synthetic reads from whole ge...
428 days ago
Comment on "Calling variants in non-diploid systems"
...l (or bacterial or viral) genomes, but we do not know exactly how many. Thus we will use the --pooled-continuous option of FreeBayes to generate frequency-based variant calls...1056 days ago
- +9 more Comments
