Results for "Maps"
Blogs
...to provide a visual means for simultaneously comparing genomes of multiple amniote species. The tool removes the burden of manually aligning these maps and allows cognitive skills t...3938 days ago
Tools to detect synteny blocks regions among multiple genomes
...mosomes (pseudomolecules), by draft sequence contigs, or by FPC physical maps (with BAC-end or marker seque...enomic analysis. It is designed for constructing and visualizing synteny maps between two or three species,...2608 days ago
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Bookmarks
BrainSpan Atlas of the Developing Human Brain
...as- web source for revealing transcriptional mechanisms involved in human brain development. Article: http://www.nbcnews.com/science/science-news/maps-unborn-human-brains-point-med...3679 days ago
- ...cture and big data expertise. Store one genome or a million using Google Genomics and take advantage of the same infrastructure that powers Search, Maps, YouTube, Gmail and Drive....
3424 days ago
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Files
Evaluation of genome assembly software based on long reads
...imal genomes, enabling new insights into evolution and sequence diversity. They have also been applied to resequencing analyses, to create detailed maps of structural variations in m...1918 days ago
Pages
Genome Assembly Tools and Software - PART2 !!
...y in quality. LACHESIS – Genome Assembly with Contact Probability MapsLACHESIS is method that e...ling contigs and/or scaffolds to full chromosomes based on the karyotype maps of Brassicaceae species and w...2683 days ago
Awesome perl frameworks, libraries and software - PART 2
...s call numbers kingpong/perl-PDF-WebKit - Convert HTML to PDF using WebKit (wkhtmltopdf) kensanata/hex-mapping - Tools to work with hex maps for roleplaying games. Usuall...2492 days ago
Top-level pages
Best book Titles for Learning Bionformatics
...ss Molecular Bioinformatics: Algorithms and Applications, Steffen Schulze-Kremer, 1995, Walter De Gruyter Introduction to Computational Biology - Maps, sequences and genomes, Micha...3915 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...oS One 6(5):e19379, 2011. Full Text Development of high-density genetic maps for barley and wheat using a...al., PLoS One 6(4):e19315, 2011. Full Text Genome evolution and meiotic maps by massively parallel DNA seq...3777 days ago
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Wire posts
News
- MutaBind is a new computational method and server created through NCBI research efforts that maps mutations on a protein structural complex, calculates changes in binding affinity, i...
2888 days ago
ResearchLabs posts
- ...l methods to design and analyse novel experimental approaches in genetics and cell biology. Future projects and goals Large-scale systematic maps of gene-gene and gene-environ...
3888 days ago
- ...ural variation (SVs) from genomic sequence data. As part of the 1000 Genomes Project and other endeavors, we have helped produce initial fine-scale maps using a variety of SV discove...
2990 days ago
Video
Dr. Ken Buetow: IS & Personalized Medicine Lecture-Part 1
...age disequilibrium methods as genetic mapping tools. The laboratory also developed methods and pipelines to generate and apply genome-wide genetic maps. In early work with genome-w...3868 days ago
Bio-Scripts
Pack a perl program with their dependencies on Ubuntu !
... of the University of... Jit@jit.aber Sequence Tube Maps: displays multiple genomic se...ces in the form of a tube mapBy Jit 5 days ago SequenceTubeMapsdisplaysmultiplegenomicsequenc...1509 days ago
Tags
pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file will be compatible with Quiver if --forQuiver optio...Tags: pbalign, maps, PacBio, reads, reference, sequences, alignments, BAM, NGS
2171 days ago
genoPlotR - plot gene and genome maps project!
genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. Features Linear representation of several segments of DNA Comp...Tags: genoPlotR, plot, gene, genome, maps, project, R
1969 days ago
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Comments
Comment on "URMAP, an ultra-fast read mapper"
map command Maps unpaired reads to a reference genome. The reference genome is stored as a UFI file created by the make_ufi command. The original FASTA file for the re...1281 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...20170918_oly_pacbio_miniasm_reads.gfa > 20170918_oly_pacbio_miniasm_reads.fasta 4 Run minimap with default settings Using the default settings maps the FASTQ reads back to the c...2165 days ago
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