Results for "NR"
Users
Location: IGB-CNR, Naples, ITALY3523 days ago
3920 days ago
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Blogs
List of gene ontology software and tools
...are the most commonly used old and new GO term enrichment determination tools. T...ral University) EasyGO is designed to automate enrichment job for experimental b...function of GOEAST is to identify significantly enriched GO terms among give list...3707 days ago
Bioinformatics PhDs - Cover Letter
...to prepare for two years of original research or some other factor that enriches what you have to offer a... Think twice about mentioning future projects that appear entirely unrelated to your current work. D...3363 days ago
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Bookmarks
- RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012) Nature Protocols In this tutorial we cover the concepts of RNA-Seq different...
3650 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
...f reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). More at https://gatb.inria.fr/2926 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...ning proteins. It is based on a first order Markov model (MM) with an architecture that corresponds closely to the biological systems. The model is enriched with three types of stat...3942 days ago
Pages
Bio++ : C Language libraries for your biological need
...f coevolving positions in a molecule: a clustering approach. BMC Evol Biol. 2007; 7: 242.Boussau B, Gouy M. Efficient likelihood computations with nonreversible models of evolution....3945 days ago
- ...implementations of the Ruby language, including YARV, JRuby, Rubinius, IronRuby, MacRuby and HotRuby, each of which takes a different approach, with IronRuby, JRuby and MacRuby providi...
3945 days ago
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Top-level pages
Bioinformatics Courses Around the World
...bsp;and (Universitat) Pompau Fabra , Spain Roderic Guigo, Enrique Blanco, Genis Parra, Serg...iology Network - Italian Node , Consiglio Nazionale delle Ricerche (CNR), Bari, ItalyDavid Judge, Jam...3941 days ago
Most Commonly used Awk by Bioinformatician
...awk '{print $2,$4,$5}' input.txt > output.txt awk 'BEGIN{OFS="\t"}{print $2,$4,$5}' input.txt show rows between 20th and 80th: awk 'NR>=20&&NR<=80' input.txt > output...3910 days ago
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Wire posts
News
Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073938 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots...3937 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...be hosted by a bioinformatics/informatics team (7 people) (http://moulon.inra.fr/index.php/fr/equipestrans...2 referees willing to provide a letter of recommendation to joets@moulon.inra.fr.3946 days ago
- ...st challenge in the project will be to identify which of the many variants in these genomes have functional effects. Then we will try to facilitate unravelling complex interactions...
3946 days ago
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ResearchLabs posts
- ...h as cancer and congenital disorders. More http://www.nieduszynski.org/index.php http://www.path.ox.ac.uk/research/cell-biology-and-pathology/conrad-nieduszynski-group
3506 days ago
- ...er le Applicazioni del Calcolo "Mauro Picone" - CNR . The laboratory has been off...es started since 2007, and supported by several CNR projects. Main interest of Bi...experiments. More at http://bioinfo.na.iac.cnr.it/BioinfoLab/index.html...
2960 days ago
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Video
'What is Life? A 21st Century Perspective' by Dr Craig Venter
...same title is considered to be a scientific classic. The book was cited by Crick and Watson as one of the inspirations which ultimately led them to unravel the structure of DNA in 1...3902 days ago
RNA interference (RNAi): by Nature Video
...w. If you'd like to know more about the structures and processes you see in this video, check out the accompanying slideshow: http://www.nature.com/nrg/multimedia/rnai/animation/in...3890 days ago
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Bio-Scripts
Perl script to count the number of Adenine, Thymine, Guanine and Cytosine in your DNA Sequence
...Cytosine = $count_of_C\n"; print "Guanine = $count_of_G\n"; print "Thymine = $count_of_T\n"; if ($errors) { print "There were $errors unrecognized bases.\n"; }2913 days ago
Transpose the file coordinates and plot dendrogram in R
#Save this as tr.awk { for (i=1; i2615 days ago
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Groups
...d identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.nature.com/nrmicro/focus/metagenomics/index...3701 days ago
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Comments
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bioinformatics Journals (the most recent Impact Factor :: 5-year Impact Factor) WIREs Computational Molecular...1102 days ago
Comment on "Sibelia: A comparative genomics tool"
...ry short period of time, they can be quite big -- ~20*N bytes, where N is the total size of all input genomes. You can also use switch -r or --inram that will force "Sibeli...1282 days ago
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