Results for "R)"
Users
About me: ...in computational biology/ bioinformatics area to get distracted by the flood of NGS and epigenomic data, but currently we (our group and my supervisor) are trying to make sense of t...25 days ago
- About me: B.Tech Bioinformatics(IV year) Now doing Internship in ISARI(ICAR),New Delhi.
3394 days ago
- +2 more Users
Blogs
Five unique traits of effective computational biologist
...I understand completely; I have other priorities too. As much as I hate to say it, when I am passionate about my work, I am willing (though not eager) to abandon my other prioritie...3965 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
...dex expire after how many days? [1]Perform cache scanning (atstart or never)? [atstart]Cache metadata (yes...tall a Perl module using cpan:# perl -MCPAN -e 'install Bundle::BioPerl'(or)# cpancpan shell -- CPAN explo...3965 days ago
- +28 more Blogs
Bookmarks
- ...es Computation Initiative (VLSCI), University of Melbourne. It is based around BWA, GATK and ENSEMBL and was originally designed for human (or similar) data. The master branch is co...
3667 days ago
- ...le performance of over 97% strong scaling. Availability and Implementation: MEGADOCK 4.0 is written in C++ with OpenMPI and NVIDIA CUDA 5.0 (or later) and is freely available to al...
3573 days ago
- +44 more Bookmarks
Files
- ...perly to 3'UTR region of a gene and hence block binding of TF /translation of gene. CpG regions is known to located at promoter region of gene (5' UTR) and usually hypomethylated wh...
3575 days ago
Pages
BioRuby :Ruby packages for biologist
...grated environment in bioinformatics for the Ruby language. This project is supported by University of Tokyo (Human Genome Center), Kyoto University(Bioinformatics Center) and the Open Bio Foundation....3962 days ago
Check Linux server configuration !!
...bsp; : 6model : 15model name : Intel(R) Xeon(R) CPU &n...3667 days ago
- +10 more Pages
Top-level pages
- ...on." - U.S. Environmental Protection Agency's ComputationalToxicology Research Glossary.What is Bioinformatics? "One idea for a definition: (Molecular) Bio - informatics = is concep...
3962 days ago
Bioinformatics Courses Around the World
...ology Network - Italian Node , Consiglio Nazionale delle Ricerche (CNR), Bari, ItalyDavid Judge, Jame...tugal bioinformatics training courses ( several weekly course per year) (Univ of) Helsinki , He...3958 days ago
- +29 more Top-level pages
Wire posts
News
Tivicay® (dolutegravir) 50-mg tablets for HIV-1
FDA has approved Viiv Healthcare’s integrase inhibitor Tivicay® (dolutegravir) 50-mg tablets, for use with other antiretroviral agents in treating HIV-1 infection. ViiV He...3929 days ago
- ...tical Measures; Correlation between Two Sets of Data; Correlation between Many Sets of Data; Quantitative Structure–Activity Relationships (QSAR); Structure property correlati...
3844 days ago
- +12 more News
Opportunity posts
- ...l/e-mail shaktis@gbu.ac.in or shaktisahi@gmail.com. No TA and DA will be paid for appearing for the interview. Dr. Shakti Sahi (Principle Investigator) Advertisement: www.gbu.ac...
3963 days ago
Postdoctoral Associate - Bioinformatics at Duke University Medical Center
...nce in penalized regression methods, data base manipulation; and strong programming skills in order to conduct Monte Carlo studies and applications (R). Candidate must have excellen...3935 days ago
- +79 more Opportunity posts
ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
We study the organization and evolution of biological systems using computational biology and bioinformatics techniques. We seek to accurately predict links, such as...3962 days ago
The Ontario Institute for Cancer Research (OICR) Genomics Lab , Toronto, Canada.
The Human Genome Project led to the development of a wide array of technologies to screen the genome and its products (genes, proteins, metabolites) and molecules tha...3934 days ago
- +1 more ResearchLabs posts
Fun
Perl Poem: Parse it in both Perl and English!
...(please, please); open yourself, wide;join (you, me),connect (us,together), tell me. do something if d...-beg-you, close them, yet. accept (yourself, changes),bind (grief, despair); require truth, goodness if-...3933 days ago
Bioinformatician special skills !!
...e the same. Pretty codes for them ... /([+-]?\ *(?:\d+(?:\.\d*)?|\.\d+)(?:[eE]([+-]?\d+))?)/; next unless /((?:(?!\\$).)*)/; $line =~ /^(.+)(e|r)(.*)$/; /"(?:[^"\\]++|\\.)*+"...3910 days ago
Video
DNA is packaged in a chromosome experiment
...still ensuring appropriate access to it (in mammalian cells approximately 2 m of linear DNA have to be packed into a nucleus of roughly 10 µm diameter). Nucleosomes are folded throu...3891 days ago
Bio-Scripts
- ...# Go to sequence directory and open it (i.e, read contents) chdir($myDir) || die "Cannot change to $myD...annot open .: $!"; # Open $myDir foreach $seqFile (sort readdir(DIR)) { if ($seqFile =~ /\.f...
2930 days ago
A multilayer perceptron (MLP) neural network in Perl
#!/usr/local/bin/perl -w #################################################### #MLP neural network in Perl Original source code by Phil Brierley #Translated into...2930 days ago
- +53 more Bio-Scripts
Tags
- A Computational biologist, currently investigating the impact of transposable elements on the adaptation of the rice genome under fungal pathogen challenges and genome duplication. Experienced in using next-generation sequencing technologies like shotgun sequencing, linked reads, and long-read se...
Skills: Programming (Python, Linux, Bash, R), Computational Biology, NGS technologies, WGS, RNA Seq, Repeats, Variant Calling
1154 days ago
Comments
Comment on "Short-read assembly using Spades !"
...-read assembly is the process of constructing a genome sequence from a large number of short sequencing reads. SPAdes (St. Petersburg genome assembler) is a popular software tool fo...430 days ago
- ...re are some of them: ART: The ART (short for Artificial Read Simulator) is a popular tool for generat...PIRS: PIRS (short for Profile-based Illumina pair-end Reads Simulator) is a short read simulator tha...
430 days ago
- +19 more Comments
