BOL: Results for "nr"

Results for "nr"

- Jit@jit.aber
List of gene ontology software and tools
...are the most commonly used old and new GO term enrichment determination tools. T...ral University) EasyGO is designed to automate enrichment job for experimental b...function of GOEAST is to identify significantly enriched GO terms among give list...
3718 days ago
- Martin Jones@martin
Bioinformatics PhDs - Cover Letter
...to prepare for two years of original research or some other factor that enriches what you have to offer a... Think twice about mentioning future projects that appear entirely unrelated to your current work. D...
3374 days ago
+16 more Blogs

- Rahul Nayak@rahul
Bioinformatics Protocols
RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012) Nature Protocols In this tutorial we cover the concepts of RNA-Seq different...
3661 days ago
- Jit@jit.aber
GATB : Genome Analysis Toolbox with de-Bruijn graph
...f reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). More at https://gatb.inria.fr/
2937 days ago
+34 more Bookmarks

- Rahul Agarwal@raag
Master Thesis: Trans-membrane topology prediction through Markov based decoders
...ning proteins. It is based on a first order Markov model (MM) with an architecture that corresponds closely to the biological systems. The model is enriched with three types of stat...
3953 days ago

- Jitendra Narayan@admin
Bioinformatics Courses Around the World
...bsp;and (Universitat) Pompau Fabra , Spain Roderic Guigo, Enrique Blanco, Genis Parra, Serg...iology Network - Italian Node , Consiglio Nazionale delle Ricerche (CNR), Bari, ItalyDavid Judge, Jam...
3951 days ago
- Neelam Jha@neelam
Most Commonly used Awk by Bioinformatician
...awk '{print $2,$4,$5}' input.txt > output.txt awk 'BEGIN{OFS="\t"}{print $2,$4,$5}' input.txt show rows between 20th and 80th: awk 'NR>=20&&NR<=80' input.txt > output...
3920 days ago
+22 more Top-level pages

- Jitendra Narayan@admin
To round a floating-point value to a certain number of decimal places: $rounded = sprintf("%.2f", $unrounded); #Tipsoftheday #Perl
3918 days ago
- Neelam Jha@neelam
zcat input_file.fastq.gz | awk 'NR%4==1{printf ">%s\n", substr($0,2)}NR%4==2{print}' > output_file.fa #fastaQ2fasta #fastaq #fasta #Oneliner
3654 days ago
+25 more Wire posts

- Jitendra Narayan@admin
Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003107
3948 days ago
- Jit@jit.aber
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots...
3948 days ago
+18 more News

- Jitendra Narayan@admin
Structural polymorphism analysis from NGS data
...be hosted by a bioinformatics/informatics team (7 people) (http://moulon.inra.fr/index.php/fr/equipestrans...2 referees willing to provide a letter of recommendation to joets@moulon.inra.fr.
3956 days ago
- Jitendra Narayan@admin
PhD Positions
...st challenge in the project will be to identify which of the many variants in these genomes have functional effects. Then we will try to facilitate unravelling complex interactions...
3956 days ago
+45 more Opportunity posts

- Jit@jit.aber
Nieduszynski Group
...h as cancer and congenital disorders. More http://www.nieduszynski.org/index.php http://www.path.ox.ac.uk/research/cell-biology-and-pathology/conrad-nieduszynski-group
3516 days ago
- Abhimanyu Singh@abhimanyu
BioinfoLab
...er le Applicazioni del Calcolo "Mauro Picone" - CNR . The laboratory has been off...es started since 2007, and supported by several CNR projects. Main interest of Bi...experiments. More at http://bioinfo.na.iac.cnr.it/BioinfoLab/index.html...
2971 days ago
+1 more ResearchLabs posts

- Jitendra Narayan@admin
'What is Life? A 21st Century Perspective' by Dr Craig Venter
...same title is considered to be a scientific classic. The book was cited by Crick and Watson as one of the inspirations which ultimately led them to unravel the structure of DNA in 1...
3912 days ago
- Jitendra Narayan@admin
RNA interference (RNAi): by Nature Video
...w. If you'd like to know more about the structures and processes you see in this video, check out the accompanying slideshow: http://www.nature.com/nrg/multimedia/rnai/animation/in...
3901 days ago
+2 more Video

- Anjana@anjana
Perl script to count the number of Adenine, Thymine, Guanine and Cytosine in your DNA Sequence
...Cytosine = $count_of_C\n"; print "Guanine = $count_of_G\n"; print "Thymine = $count_of_T\n"; if ($errors) { print "There were $errors unrecognized bases.\n"; }
2924 days ago
- Abhimanyu Singh@abhimanyu
Transpose the file coordinates and plot dendrogram in R
#Save this as tr.awk { for (i=1; i
2625 days ago
+20 more Bio-Scripts

Metagenomics
...d identify the millions of microbes from these samples. Example: Gut microbiome, soil sample, water, etc. More information: http://www.nature.com/nrmicro/focus/metagenomics/index...
3711 days ago

- LEGE@lege
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bioinformatics Journals (the most recent Impact Factor :: 5-year Impact Factor) WIREs Computational Molecular...
1112 days ago
- BioStar@biostar
Comment on "Sibelia: A comparative genomics tool"
...ry short period of time, they can be quite big -- ~20*N bytes, where N is the total size of all input genomes. You can also use switch -r or --inram that will force "Sibeli...
1293 days ago
+19 more Comments