Results for "structure analysis"
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analy...abbit hole and possibly never getting a solution. Learn to perform root cause analysis, learn enough about the under...3943 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and t...UI software for computational analysis? Should I use commercial bioi...to accomplice your biological analysis work. This means that if you...3700 days ago
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Bookmarks
- I bet, this website will be your best friend in near future. This helps us to explore t...from it. You can find some useful open source bioinformatics codes for your analysis work. You can use the left ba...
3909 days ago
Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Document...for Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and Mining with R.3909 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has...ials that can be used for automatic prediction of trans-membrane (TM) protein structur...3938 days ago
- Bioinformatician life is interconnected, they always dream for a powerful server, little more space on server as they are generating lots of data per run, dream to publish results in good impact journals, meetings reminders :) and research analysis off course!!!
3903 days ago
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Discussion topics
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the...ised MinION™ device. These are a new generation of electronic molecular analysis system for use in scientific...3806 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigasci...ts-soul-searching.html http://assemblathon.org/post/44431915644/feedback-and-analysis-of-the-assemblathon-2-p &nbs...3913 days ago
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Pages
Bio++ : C Language libraries for your biological need
...oinformatics, including sequence analysis,phylogenetics, molecular evolu...ibraries are as follows:Sequence analysis Sequence and Site objects, w...nd molecular evolution Data structure and IO Phylogenetic trees.I...et of C++ libraries for sequence analysis, phylogenetics, molecular evo...3941 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing,...3940 days ago
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Top-level pages
- The completion of the first human genome drafts was just a start of the modern DNA sequ...the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequenc...
3941 days ago
- ...of biological predictions and analysis" -- Jitendra Narayan "Th...collection, organization and analysis of large amounts of biological...s of large data sets; (2) the analysis and interpretation of various...protein domains, and protein structures; and (3) the development and...
3940 days ago
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Wire posts
News
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes t...he latest developments in understanding chromatin structure and function, particularly ge...e leading researchers in chromatin and chromosome structur...3918 days ago
- PhylomeDB is a public database for complete collection...y and paralogy predictions which are based on the analysis of the phylogenetic trees. Th...ims at providing a high-quality phylogenetic analysis of different genomes , i...
3912 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Clim...to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flagship...omputational facilities and expertise in NGS data analysis, and will benefit as well fro...3942 days ago
- van Noort Group is looking for PhD fellows We currently access an unprecedented know...a prerequisite for this position. Experience with high throughput sequencing analysis methods, machine learning, pr...
3942 days ago
- +216 more Opportunity posts
ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our lon..., with an emphasis on mitosis. We develop in-vitro assays, quantitative image analysis and cytosim, a computer simul...
3942 days ago
- Melanie Bahlo is an applied statistician working in the areas of statistical genetics,...pedigrees Investigation of DNA sharing in distantly related individuals CNV analysis in pedigrees and connections...
3941 days ago
- +57 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this.... BLAST : Eak khoj Munna...Proteomics Koi Khel Nahi Jish Desh Mein Day Hoff Rehta Hai PDB Ek Numbari Structur...3912 days ago
Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
...on outstrip advances in computing power to perform current methods of analysis. Extracting new science from t...ting-edge algorithms, including spectral graph theory and modern data structures, can be used to attack chal...3895 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming...tion strain Bacillus subtilis. Until now, genome analysis could only be done in nationa...-generation sequencer development has made genome analysis possible in an ordinary lab....3910 days ago
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Bio-Scripts
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GN...ated and ready for import into a spreadsheet program for browsing and further analysis. # use strict; use warni...2907 days ago
Read a tab delimited file and search with perl
use strict; use warnings; use Data::Dumper; use Text::CSV; use IO::Handle; my $file = "/home/urbe/Tools/Alienomics_v0.1/Alienomics/output/intermediate_files/rRNA/refGene.megablast"; open my $fh, "[0]\n"; warn Dumper $row; # To see the structure }2518 days ago
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Polls
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a progra...basically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3524 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3519 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...iptome, proteome, and metabolome analysis to reveal the molecular profil...pe of the project. The molecular structures involved in the development...f useful tools for comprehensive analysis and comparison of high-throug...line for prokaryotic TCS protein structure prediction and inhibitor des...2355 days ago
Groups
R is a free software programming language and a software en...ners for developing statistical software and data analysis. R's popularity has increased...cal packages. Bioconductor provides tools for the analysis and comprehension of high-thr...3944 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of t...3900 days ago
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Tags
Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a book. In books, we can experience new things that we would not normally be able to experience. It is proved that books can change our lives and other people’s lives. Reading can make us more intelligent, updated, imaginative. Withou...Tags: bioinformatics, computational biology, machine learning, statisitics, data mining, algorithms, sequence analysis, structure analysis, database, phylogeny, genes, strings, MSA
3910 days ago
Comments
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Genome synteny analysis is the comparison of the genomic structure and gene content of two or mo...et the results of the synteny analysis by identifying conserved geno...te the results of the synteny analysis by comparing them to other so...rough understanding of genome structure, gene content, and evolution...416 days ago
Comment on "Running Trinity on RNA-seq !"
...data explorations. Perform differential expression analysis. Trinity provides direct support for several DE analysis methods, including edgeR, DES...der using the Trinity transcriptome assemblies for gene structure annotation using PASA....2116 days ago
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