Results for "target"
Users
About me: Background: Raghava is a scientist working at Bioinformatics Centre, Institute of Microbial Technology (IMTECH), Chandigarh, India. He did his MSc Physics from N.A.S. C...3502 days ago
- About me: Abbas completed his diploma in biology at the age of 18 years (2011) from Shahid Beheshti High School and is graduate in genetics of the Shahid Chamran University of Ah...
2220 days ago
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Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...Sorry, we have to rerun the configuration dialog for CPAN.pm dueto some missing parameters...CPAN build and cache directory? [/root/.cpan]Download target directory? [/root/.cpan/sourc...3958 days ago
List of gene ontology software and tools
...first by searching for enriched GO terms that appear densely at the top of a ranked list of genes or by searching for enriched GO terms in a target list of genes compared to a b...3718 days ago
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Bookmarks
- ...ger allows packaging of applications written in Perl. Packaged applications can be distributed without the need for an installation of Perl on the target machine. Cava Packager is cur...
3925 days ago
Statistics of current Sequencing and Bioinformatics market
This survey conducted by Oxford Gene Technology, provider of innovative genetics research and biomarker solutions to advance mol...3918 days ago
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Files
- ...kle this deadly cancer. Hence we need to find out new therapeutic target. One way is to look the relat...ression of host gene. Thus , integration of these three data reveal new targets and pathways important for c...
3569 days ago
Pages
A guide for complete R beginners :- Installing R packages
Part of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packa...3366 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short...2694 days ago
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Top-level pages
- ...lowing references are a snapshot of the moving target named bioinformatics. ... " -...aches. Membrane proteins are interesting drug targets. It is estimated that membra...nformatics are relevant for pharmacology. Drug targets in infectious organisms can...
3955 days ago
List of Bioinformatics and Computational Biology Journals
Hi Bioinformatician and Computational Biologist, this is the comprehensive list of all (?) the bioinformatics and computational biology journals. Please update me...3736 days ago
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Wire posts
News
High Density Sheep SNP Genotyping Chip released!!!
...The OvineSNP50 BeadChip features over 54,241 evenly spaced probes that target SNPs, offering more than suff...Genomics Consortium. It features over 54,241 evenly spaced probes that target single nucleotide polymorphis...3905 days ago
- The new version of Modeller, 9.13, is now available for download! Please see the download page at http://salilab.org/modeller/ for more information. If you have a li...
3742 days ago
- +49 more News
Opportunity posts
Scientist-B @ VECTOR CONTROL RESEARCH CENTRE
...b requirements i) To apply Bioinformatics / Computational Biology tools in understanding interactions between vectors and parasites/ pathogens and target based development of drug / i...3827 days ago
Special Project Scientist – Sorghum Genomics
...othesis related to adaptation in multiple geographic regions Develop SNP assays from large scale GBS and other re-sequencing data for several target traits utilizing available ph...3646 days ago
- +5 more Opportunity posts
ResearchLabs posts
- ...sites. Area of Interest :: Comparison of force field simulations. Analysis of DNA-protein interactions using molecular mechanics methods.Drug Target Identification using in silic...
3893 days ago
Prof. Dr. med. Andreas Ramming
...n a permanent basis. In the remaining cases, these therapies miss their target from the beginning or later d...s of these misdirected signaling pathways for the development of novel, targeted therapies http://www.med...1741 days ago
Fun
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet, Sharon Hopkins. She has written quite a few Perl poems, as well as a paper on P...3927 days ago
Video
Influenza animation - flu virus mechanism
Animation of the mechanism of an influenza virus and how Crucell's antibodies target the HA1 proteins on the virus and prevent further spread of influenza. Client: Crucell Direction...3861 days ago
Bio-Scripts
Create genome scaffolding with Perl
...id >= $projOpts->{"pid"}) && $querySeqs{$qName} && $targetSeqs{$tName}){ my %meta = (); my $shortTarget = ($tSize < $qSize) ? 1 : 0;...; my %displayed = (); foreach my $seqID (sort(keys(%targetSeqs))){ my $fullName = $ta...2316 days ago
- ...t system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linu...t system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linu...t system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linu...
2159 days ago
- +8 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
..., the employed method has to be unique for the targeted biological problem and by u...l biosensor for quick on-site applications are targeted through the development of...ecifically aiming for biomarker and novel drug target discovery. In addition to thi...2370 days ago
Tags
mosdepth: fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
mosdepth can output: per-base depth about 2x as fast samtools depth--about 25 minutes of CPU time for a 30X genome.mean per-window depth given a window size--as would be used for CNV calling.the mean per-region given a BED file of regions.a distribution of proportion of bases covered at or above...Tags: mosdepth, fast, BAM, CRAM, depth, calculation, WGS, exome, target, sequencing
1640 days ago
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Comments
Comment on "Short-read assembly using Spades !"
SPAdes (St. Petersburg genome assembler) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBi...429 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
Sequencing coverage is defined as the average number of reads that covers each base of the reference genome. Estimating the sequencing coverage is very i...591 days ago
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