BOL

Where is genomics going next? https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1626-2 #Next #Genomics #Future

This script will #extract the intron feature #gff3 and sequence from gene_exon gff3 and fasta file. Extract-intron-from-gff3

Genome Information by Organism https://www.ncbi.nlm.nih.gov/genome/browse/#!/overview/ #Genome #information #NCBI

#Polishing PacBio assemblies with Arrow and Pilon https://flowersoftheocean.wordpress.com/2018/04/16/polishing-pacbio-assemblies-with-arrow-and-pilon/ #polish #Pilon

#Database resources of the National Center for Biotechnology Information https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531099/ #NCBI

Biotechnology scientist jobs at http://www.dbtindia.nic.in/vacancies/ #Job #Biotechnology #DBTIndia #DBT

for i in $(ls *.ab1); do convert_trace -out_format scf < $i > ${i%.ab1*}.scf; done #Convert #AB12SCF #SCF #AB1

(smrttools) ➜ allBam for i in *.bam; do bamtools convert -format fasta -in $i -out $i.fasta; done #Convert #fasta

A De Novo Genome #Assembly Algorithm for #Repeats and Nonrepeats https://www.hindawi.com/journals/bmri/2014/736473/

Bioconda packages for bioinformatician https://conda-static.anaconda.org/bioconda/ #conda #bioconda #packages #list #tools

Genome assembly tutorial https://bioinformaticsdotca.github.io/high-throughput_biology_2017_module6_lab #tutorial #assembly #tools #steps #pipeline

how to polish a genome assembly https://nanopolish.readthedocs.io/en/latest/quickstart_consensus.html #polish #nanopolish #ont #nanopore #consensus

Using R language with Anaconda https://docs.anaconda.com/anaconda/user-guide/tasks/use-r-language/ #R #Anaconda #Language

Create user with bash $su - joker #user #bash #create

Read a file in terminal $ less file2 #bash #less