BOL

https://genomeevol.wordpress.com/ #Evolution #Laboratory

TIGER: tiled iterative genome assembler https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526431/ #genome #assembly #tool

Ten quick tips for sharing open genomic data https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006472 #data #tips #genomics

Is It #Ordered Correctly? #Validating #Genome #Assemblies by Optical Mapping http://www.plantcell.org/content/30/1/7

Gene prediction tools http://genome.crg.es/courses/laCaixa05/Prediction/index.html #Genes #Predicts

Export the PATH in Linux $ PATH="/home/urbe/Tools/ALLHiC/scripts:${PATH}" and then $ export PATH #Path #Set #Variable

Add number in fasta header $ awk '/^>/{$0=$0"_"(++i)}1' infile.fa #fasta #header #add #number #count

Blast database https://ftp.ncbi.nih.gov/blast/db/ #blast #database

#Split the #BAM file $ /home/urbe/Tools/bamtools/bin/bamtools split -in improved3.fasta.sorted.bam -reference #bamtools

Extract sequence by ids $ xargs samtools faidx Adineta_vaga.v2.pep.fa < AlienIds > allAlienSeq.fa #Extract #Ids #Sequences

https://iisc.ac.in/post-docs/ IISc PostDoc #postdoc #iisc

Bioinformatics training http://ce3c.ciencias.ulisboa.pt/training/?cat=13 #Training

https://dl.winehq.org/wine-builds/macosx/download.html #wine #download

print_fs("~/flowchart/", depth = 4) #Print #FileStructure

Victorian Bioinformatics Consortium http://www.vicbioinformatics.com/software.shtml #Bioinformatics #Tools