Results for "linear"
Blogs
...al genome maps from the comparison of the organization of extant-related genomes. ANGES can reconstruct ancestral genome maps for multichromosomal linear genomes and unichromosomal ci...2522 days ago
List of motif discovery tools !
...ne the protein structure space. DILIMOT -- discovery of linear motifs in proteins Predict short linear motifs (3-8 residues) in a se...-- identifying signatures in protein termini Identify short linear signatures in protein termini...1985 days ago
- +1 more Blogs
Bookmarks
Barrnap: Bacterial ribosomal RNA predictor
...tyle. NHMMER binaries for 64-bit Linux and Mac OS X are included and will be auto-detected. Multithreading is supported and one can expect roughly linear speed-ups with more CPUs.&nbs...2542 days ago
- ...for newer releases of Easyfig please visit our new webpage - https://mjsull.github.io/Easyfig. Easyfig is a Python application for creating linear comparison figures of multipl...
2920 days ago
- +18 more Bookmarks
Pages
Bio++ : C Language libraries for your biological need
...ctorial, etc.)Vector tools: element-wise functions, statistics (mean, var, sd, correlation, information theory)Classes for matrices implementation.Linear algebra: eigen decomposition,...3939 days ago
Genome Assembly Tools and Software - PART2 !!
...the sequences which can be used as shotgun reads. SLiQ – Simple linear Inequalities based Mate-Pair reads Filtering and ScaffoldingSLIQ , a set of simple linear inequalities derived from the...2677 days ago
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Top-level pages
- ...for the moment. The most popular greedy algorithm is finding the minimal spanning tree as given by Kruskal. Linear programming The problem is expressed as a set of linear inequalities and then an atte...
3938 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...available: Intro to programming and graphics Data manipulation and functions Graphics for exploratory data analysis Introductory statistics Linear regression A Little Book...3771 days ago
- +3 more Top-level pages
Wire posts
News
- ...siderably speed GWAS computation time on a notebook book computer. More http://www.extension.org/pages/68354/upcoming-webinar:-fast-semi-parallel-linear-and-logistic-regression-for-g...
3880 days ago
- ...cal sessions planned are summarized as follows:Topics of Teaching and Research1. Review of postulates of quantum mechanics; Some key concepts from linear algebra; The Schrodinger equa...
3821 days ago
ResearchLabs posts
- ...biology. Making the most of this revolution requires the marriage of researchers from mathematical and biological backgrounds. Research Area: Linear models for microarray data D...
3939 days ago
Video
DNA is packaged in a chromosome experiment
...used to pack the large eukaryotic genomes into the nucleus while still ensuring appropriate access to it (in mammalian cells approximately 2 m of linear DNA have to be packed into a...3868 days ago
- ...way I've seen it defined is the intersection with health information, computer science and health care and health systems but I think that's very linear and very narrow in what it is...
3698 days ago
Bio-Scripts
A multilayer perceptron (MLP) neural network in Perl
...ode by Phil Brierley #Translated into perl - ccolbourn Oct 2004 #################################################### #Tanh hidden neurons #Linear output neuron #To include...2907 days ago
- ...40 -o jellyfish.kmers.fa.histo mer_counts.jf ---------------------------------------------- --------------- Inchworm --------------------- -- (Linear contig construction from k-me...
2119 days ago
Tags
- GView is a Java application for viewing and examining prokaryotic genomes in a circular or linear context. It accepts standard sequence file formats and an optional style specification file to generate customizable, publication quality genome maps in bitmap and scalable vector graphics formats. G...
Tags: GView, Java, application, view, prokaryote, genomes, circular, linear, context
2479 days ago
Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that may include insertions, deletions, skips and clipping, but may not include direction changes (i.e. one portion of the alignment on forward strand and another portion of alignment on reverse strand). ...Tags: Linear, Chimeric, Supplementary, Primary, Secondary, Alignments
1829 days ago
Comments
Comment on "Tools for Differential expression analysis"
...differential expression analysis of RNA-Seq data. It uses a generalized linear model to model the count data...ferential expression analysis of microarray and RNA-Seq data. It uses a linear model to model the gene expre...412 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
... Yes Yes Yes Yes Linear Regression Yes... Yes Generalized Linear Models Yes &...3543 days ago
