BOL

An increasing number of phased (i.e. with resolved haplotypes) reference genomes are available. However, most genetic variant calling tools do not explicitly account for haplotype structure. Here, we present HaploTypo, a pipeline tailored to resolve...

The Whole Earth Cataloguer http://www.sactownmag.com/June-July-2018/The-Whole-Earth-Cataloguer/ #Whole #Earth #Cataloguer

INSA Exchange Programme With Foreign Academies and Organisations

#Bioinformatics #WalkIn at #AIIMS, India https://aiims.edu/images/pdf/recruitment/advertisement/Advertisement%20for%20the%20post%20of%20JRF%20in%20an%20ICMR%20funded%20project.pdf

The BLAST+ 2.10.0 release is now available from at FTP site. The new version offers the following improvements:

The is an introductory course that is aimed at students who will need to preform phylogenetic analyses in their work, but who have little or no experience with phylogenetic analyses.

Useful links  https://towardsdatascience.com/introduction-to-genetic-algorithms-including-example-code-e396e98d8bf3 https://github.com/memento/GeneticAlgorithm

The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplementary information on benchmarking procedure as well as test data are publicly accessible at the project documentation...

This study reports sequence from 1,267 individuals that includes 598 individuals representing 55 ethnic groups that span the major language groups across India.

http://www.nrcpb.res.in/writereaddata/files/opportunities/ICAR-NASF%20RA%20SRF%20interview%202019-converted_0.pdf #NIPB #Plant #WalkIn

Bioinformatics jobs at Nevada, USA https://www.unlv.edu/news-story/open-job-positions

A “#Forward #Genomics” Approach Links #Genotype to #Phenotype using Independent Phenotypic Losses among Related Species https://www.cell.com/cell-reports/fulltext/S2211-1247(12)00272-0

So you want to be a computational biologist? https://www.nature.com/articles/nbt.2740 #computational_biology #bioinformatics

Check out bioinformatics jobs in Australia  https://www.abacbs.org/jobs-detailed

phyloXML (example) is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch...

https://github.com/crazyhottommy/getting-started-with-genomics-tools-and-resources/blob/master/Next%20Generation%20Sequencing%20spreadsheet%20-%20T.tsv #NGS #CheatSheet

#BlobToolKit can be used during #assembly to filter non-target DNA, helping researchers produce assemblies with high biological credibility. https://blobtoolkit.genomehubs.org/view #Genome #Blob #Con

Miniasm is a great long-read assembly tool: straight-forward, effective and very fast. However, it does not include a polishing step, so its assemblies have a high error rate – they are essentially made of stitched-together pieces of long...