BOL: All Site Activity

All Site Activity

- Manisha Mishra@manisha
Manisha Mishra bookmarked Pandoc: The universal markup converter 1874 days ago

Pandoc is a Haskell library for converting from one markup format to another, and a command-line tool that uses this library. Pandoc is a free and open-source document converter, widely used as a writing tool and as a basis for...

https://github.com/jgm/pandoc
- Manisha Mishra@manisha
Manisha Mishra bookmarked MMseqs2: ultra fast and sensitive sequence search and clustering suite 1874 days ago

MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin)...

https://github.com/soedinglab/MMseqs2
- Jit@jit.aber
Jit created a new bio-script Install and set up i-adhore for synteny and wgd analysis ! -- step by step -- 1875 days ago
- BioStar@biostar
BioStar created a new bio-script Set up WGD environment using conda ! 1875 days ago
- Jit@jit.aber
Jit created a new bio-script Install gffread using Conda ! 1876 days ago
- BioStar@biostar
BioStar published a blog post Protocol for De novo Genome Assembly using Illumina Reads 1876 days ago

In this protocol, we address and describe the de novo assembly method for small to medium-sized genomes.
- Jit@jit.aber
Jit commented on the blog chromoMap-An R package for Interactive visualization and mapping of human chromosomes 1876 days ago

Detail documentation is available at https://lakshay-anand.github.io/chromoMap/docs.html
- Jit@jit.aber
Jit posted to the wire 1876 days ago

Install Kraken full database. $ kraken2-build --standard -db /media/urbe/MyADrive/tmp_JitDB/
- BioStar@biostar
BioStar published a news post SPADes team announce new version SPADes v3.15 1877 days ago

New SPAdes 3.15.0.0. announced by the SPADes team
- Jit@jit.aber
Jit bookmarked BUSCO datasets ! 1879 days ago

The BUSCO software now directly downloads the necessary datasets, specified by the user or automatically selected. To display all available datasets busco --list-datasets You can also download them manually and see...

https://busco-data.ezlab.org/v4/data/lineages/
- Jit@jit.aber
Jit bookmarked MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic... 1879 days ago

MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. Metaeuk combines the fast and sensitive homology search capabilities of MMseqs2 with a dynamic programming procedure to...

https://github.com/soedinglab/metaeuk
- Jit@jit.aber
Jit created a new bio-script Install wgd cli on linux ! 1879 days ago
- Shruti Paniwala@shruti
Shruti Paniwala posted to the wire 1879 days ago

Understanding mutiple alignment format http://www.bx.psu.edu/~dcking/man/maf.xhtml #MSA #Format #Alignment
- Shruti Paniwala@shruti
Shruti Paniwala posted to the wire 1879 days ago

Understanding Natural Selection dN_dS https://www.youtube.com/watch?v=vwmuvcDh9ZM&pbjreload=101 #dN_dS
- Shruti Paniwala@shruti
Shruti Paniwala posted to the wire 1879 days ago

I heard some bad updates of scamming from BioCode ... https://www.biocode.ltd/internship #Care #Scam
- BioStar@biostar
BioStar commented on a page titled Installing BLAT on Linux ! 1882 days ago

Get the code. The best way to do this now for Unix users is via Git following the instructions at: http://genome.ucsc.edu/admin/git.html Or, fetch the entire source in a single file: rsync -azvP...
- BioStar@biostar
BioStar posted to the wire 1882 days ago

Delete all the executables in current directory. $ find . -maxdepth 1 -type f -executable -exec rm {} + #Delete #CurrrentDir
- BioStar@biostar
Neel chose the best answer to the question How to resolve the error "uuid.h: No such file or directory" 1882 days ago

You might need to install the libuuid-devel package to obtain the /usr/include/uuid/ directory of files. This appears to be a new dependency with this recent addition of uuid code. Try following with Ubuntu sudo apt-get install...
- BioStar@biostar
BioStar answered the question How to resolve the error "uuid.h: No such file or directory" 1882 days ago

You might need to install the libuuid-devel package to obtain the /usr/include/uuid/ directory of files. This appears to be a new dependency with this recent addition of uuid code. Try following with Ubuntu sudo apt-get install...
- Neel@neelam
Neel asked How to resolve the error "uuid.h: No such file or directory" 1882 days ago

I receive following error while compiling kent ../inc/uuid.h:8:10: fatal error: uuid/uuid.h: No such file or directory #include <uuid/uuid.h> ^~~~~~~~~~~~~compilation terminated.../inc/common.mk:420: recipe for target 'uuid.o' failedmake[1]:...

BOL

Our Sponsors

All Site Activity