BOL: All Site Activity

All Site Activity

- Jit@jit.aber
Jit created a new bio-script Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases ! 1921 days ago
- Rahul Nayak@rahul
Rahul Nayak bookmarked Flanker 1923 days ago

Flanker, a Python package which performs alignment-free clustering of gene flanking sequences in a consistent format, allowing investigation of mobile genetic elements (MGEs) without prior knowledge of their structure. Flanker can be...

https://github.com/wtmatlock/flanker
- Neel@neelam
Neel published a blog post Run bash script in Perl program ! 1924 days ago

Perl provides various features and operators for the execution of external commands (described as follows), which are unique in their own way. They vary slightly from one another, making it difficult for Perl beginners to choose between them.
- Neel@neelam
Neel created a new bio-script Perl script to run awk inside perl 1924 days ago
- Neel@neelam
Neel created a new bio-script Perl IPC::Open2 module 1924 days ago
- Neel@neelam
Neel bookmarked FiNGS: Filters for Next Generation Sequencing 1924 days ago

Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...

https://github.com/cpwardell/FiNGS
- Shruti Paniwala@shruti
Shruti Paniwala posted to the wire 1925 days ago

Computational Genomics with R http://compgenomr.github.io/book/ #R #Computational #Genomics #Book #Tutorial
- LEGE@lege
LEGE created a new bio-script Perl script to get all the descendent in a tree ! 1928 days ago
- LEGE@lege
LEGE posted a new ad in the Opportunity Lecturer in Evolutionary Biology (Bioinformatics) at DEPARTMENT of ZOOLOGY | TE TARI MĀTAI KARAREHE... 1928 days ago
- Neel@neelam
Neel posted to the wire 1929 days ago

Bioinformatics courses for African countries https://www.uom.ac.mu/index.php/ngs-bioinformatics-course #Africa #Courses #NGS #Network
- Neel@neelam
Neel posted a new ad in the ResearchLabs Katherine Belov Lab 1929 days ago
- LEGE@lege
LEGE posted a new ad in the ResearchLabs Svardal lab 1931 days ago
- Jit@jit.aber
Jit posted to the wire 1933 days ago

$ export PERL5LIB=/usr/share/perl5/:/usr/lib/x86_64-linux-gnu/perl5/5.26/Text/ #Set #Path #Perl #Module
- Jit@jit.aber
Jit answered the question Where is Bio::SeqIO installed in my Linux system ? 1933 days ago

#User can find the location using V.pm module (base) jit@jit-Lenovo-ideapad-320-15ISK:~/Downloads/alienomics$ sudo apt install libv-perlReading package lists... DoneBuilding dependency tree Reading state...
- LEGE@lege
LEGE asked Where is Bio::SeqIO installed in my Linux system ? 1933 days ago

How to find the location of the module installed
- LEGE@lege
LEGE created a new bio-script Parse the NCBI taxonomy database with Perl ! 1933 days ago
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary posted to the wire 1934 days ago

Ten simple rules for engaging with artificial intelligence in biomedicine https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1008531 #Rules #AI #BioMedicine
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary posted to the wire 1934 days ago

Bioinformatics walkIn at IRVI http://www.ivri.nic.in/Jobs/Jobs12022021.pdf #IRVI #WalkIn #Project
- LEGE@lege
LEGE asked Alienomics "environment is inconsistent" error ? 1935 days ago

$ conda install -c jnarayan81 alienomics The environment is inconsistent, please check the package plan carefullyThe following packages are causing the inconsistency: - defaults/linux-64::jupyter==1.0.0=py37_7 -...
- BioQueen@bioqueen
BioQueen created a new bio-script Install ATOM editor on Elemantory OS / Ubuntu 1937 days ago

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