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The Wire
#Assembly
Wire posts tagged with 'Assembly'
Jit
@jit.aber
Thread
By
Jit
2794 days ago
Understanding N50
http:/
/
jermdemo.blogspot.be/
2008/
11/
calculating-n50-from-velvet-output.html
#N50
#Assembly
#Genome
#Contigs
Poonam Mahapatra
@poonam
Thread
By
Poonam Mahapatra
2805 days ago
DiscovarDenovo assembly ppt
https:/
/
banana-slug.soe.ucsc.edu/
_media/
team_5_report_1.pdf
#PPT
#Assembly
#Help
#Steps
Jit
@jit.aber
Thread
By
Jit
2865 days ago
De
#Bruijn
#Graph
#assembly
http:/
/
www.cs.jhu.edu/
~langmea/
resources/
lecture_notes/
assembly_dbg.pdf
Abhinav
@abhinav
Thread
By
Abhinav
2951 days ago
#ConPADE
: Genome
#Assembly
Ploidy Estimation from
#Next
-Generation Sequencing Data
http:/
/
journals.plos.org/
ploscompbiol/
article?id=10.1371/
journal.pcbi.1004229
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3396 days ago
Consensus assembly and allele interpretation pipeline.
https:/
/
github.com/
nmdp-bioinformatics/
pipeline
#Pipeline
#Bioinformatics
#Assembly
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3486 days ago
An Opinionated History of Genome Assembly Algorithms
http:/
/
www.homolog.us/
blogs/
blog/
2014/
02/
21/
opinionated-history-genome-assembly-algorithms/
#NGS
#Assembly
#History
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3486 days ago
De novo genome assembly: what every biologist should know
http:/
/
www.nature.com/
nmeth/
journal/
v9/
n4/
full/
nmeth.1935.html
#NGS
#Assembly
#Genome
#Sequencing
#DeNovo
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3493 days ago
Genome Assembly & Analysis Tool Box (GATB)!!
http:/
/
gatb.inria.fr/
#genome
#assembly
Jit
@jit.aber
Thread
By
Jit
3494 days ago
Genome assembly algorithms
http:/
/
www.nature.com/
subjects/
genome-assembly-algorithms
#NGS
#Assembly
#Algorithms
#Genome
#Tools
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3519 days ago
SAGE: String-overlap Assembly of GEnomes
http:/
/
www.biomedcentral.com/
1471-2105/
15/
302/
abstract
#Genome
#SAGE
#Assembly
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3531 days ago
Ragout—a reference-assisted assembly tool for bacterial genomes
http:/
/
bioinformatics.oxfordjournals.org/
content/
30/
12/
i302.short
#Genome
#Assembly
#Reference
#Ragout
#Bacteria
Jit
@jit.aber
Thread
By
Jit
3567 days ago
114 different tools out there for DNA/RNA assembly
https:/
/
twitter.com/
kbradnam/
status/
479039027249971201/
photo/
1
#Assembly
#Genome
#Tools
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3582 days ago
Maq: Mapping and Assembly with Qualities
http:/
/
maq.sourceforge.net/
#Maq
#Mapping
#Assembly
#Qualities
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3620 days ago
Assemble short reads
http:/
/
ged.msu.edu/
angus/
tutorials/
short-read-assembly.html
#Tutorial
#ABySS
#Bacteria
#Reads
#Assembly
#Genomics
#NGS
John Parker
@parker
Thread
By
John Parker
3626 days ago
Bacterial genome assembly tips using Valvet
http:/
/
pathogenomics.bham.ac.uk/
blog/
2009/
09/
tips-for-de-novo-bacterial-genome-assembly/
#Assembly
#NGS
#Bacteria
#Genome
#Tricks
#Tips
#Velvet
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