Results for "structures"
Blogs
List of bioinformatics packages for NGS analysis !
...l biology infastructure for the Julia programming language. [ web ] Rust-Bio – Rust implementations of algorithms and data structures useful for bioinformatics. [&...1163 days ago
List of gene ontology software and tools
...rporated into numerous data analysis platforms and applications, the general user of GO resources often misses fundamental distinctions about GO structures, GO annotations, and what can...3730 days ago
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Bookmarks
Java and BioJava Tutorial links
BioJava provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of this bookmark is to provide useful links for bioinformatician. Please add more useful Java and BioJava links here ...3924 days ago
Algorithms for DNA Sequencing (course offered each month)
"We will learn computational methods -- algorithms and data structures -- for analyzing DNA sequencing data. W...cing is used. We will use Python to implement key algorithms and data structures and to analyze real genomes a...3227 days ago
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Files
Prepare for Coding Interview !
...a reddit post: https://www. reddit.com/r/cscareerquestions/comments/206ajq/my_onsite_interview_experience_at_google/ #bottom-comments. 1. Data structures 2. Trees and Graph algorithm...866 days ago
Pages
Awesome perl frameworks, libraries and software - PART 2
...ing gisle/data-dump - A Perl module for pretty printing of data structures Getty/p5-facebook - Fac...t renormalist/data-dpath - A perl lib to provide access to data structures inspired by XPath rafl/nanom...2515 days ago
Awesome perl frameworks, libraries and software - PART 4
...shlint - A shell linting utility. bloonix/logstash-delete-index - A script to delete Elasticsearch indices of Logstash angavrilov/df-structures - Dwarf Fortress data st...2515 days ago
Top-level pages
- ...s, protein domains, and protein structures; and (3) the development and...ces and three–dimensional structures of proteins) launched bioinfo...nction of a protein. Protein 3D structures are stored in specific databa...n independent validation of the structures (by comparison to expected pr...
3968 days ago
Phylogenetic for Bioinformatics
...ows the probable evolution of various organisms. Not until recent decades, however, has it been possible to isolate and identify these molecular structures. phylogenetics is the st...3967 days ago
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Wire posts
News
IITM-Tokyo Tech Joint Symposium
...2020 in IITM, Chennai, India. The symposium will focus on topics in the below mentioned areas. Topics: Algorithms for biomolecular sequences / structures Bioinformatics databases and...1676 days ago
Opportunity posts
Pre- or postdoctoral research fellowship in Structural Bioinformatics in Padova
...n structural bioinformatics. Specifically, the project entails the development of novel methods, tools and databases for the analysis of protein structures. The BioComputing Laboratory...3888 days ago
Post-doctoral Research Assistant in Genetics
...holder will use cutting edge computational and laboratory approaches to generate chromosomal assemblies for sequenced genomes, study chromosomal structures and genome differences betwee...3642 days ago
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ResearchLabs posts
Computational Structural Biology Lab IITKGP
...and Protein-ligand interactions. Studies on multi-component protein assemblies and protein interactions network. Evolutionary study of protein structures, functions, and protein-prote...3251 days ago
- ...m genomic data. We run several projects in parallel, all aiming at understanding the basic principles of evolution and co-evolution of molecular structures in the cell. They are intimat...
3288 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
...r computers; it will require smarter algorithms. We show how ideas from cutting-edge algorithms, including spectral graph theory and modern data structures, can be used to attack challe...3923 days ago
IBM Research Computational Biology Center
...of how computer systems can manage, analyze, and simulate the complex structures and processes inherent in liv...tems. CompBio Research at IBM spans pattern recognition in sequences, structures and processes, the studying o...3923 days ago
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Bio-Scripts
Perl script introduces control structures, arrays and hashes.
#!/usr/bin/env perl use strict; use warnings; my @first_array = ('DNA', 'ATGCGTGC', 5, 'RNA', 'AUGC'); print $first_array[0], "\n\n"; # Scalar gives actual siz...2883 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...e patient and the reflection of these changes in some other selected body fluids will be revealed within the scope of the project. The molecular structures involved in the development a...2383 days ago
Groups
...iological data. It provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of the biojava proj...3924 days ago
...quickly and integrate your systems more effectively. Python is an easy to learn, powerful programming language. It has efficient high-level data structures and a simple but effective ap...3966 days ago
Tags
- Variation graphs provide a succinct encoding of the sequences of many genomes. A variation graph (in particular as implemented in vg) is composed of: nodes, which are labeled by sequences and ids edges, which connect two nodes via either of their respective ends paths, describe genomes,...
Tags: VG, variation, graph, structures, interchange, formats, alignment, genotyping, variant, calling, methods, snp
1580 days ago
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Comments
- ...an generate synthetic reads from whole genome sequencing data. It is designed to simulate reads from large genomes and can handle complex genome structures, such as translocations and i...
436 days ago
Comment on "Coronavirus Resources !"
SARS-CoV-2 protein structures, highlighting important structural features to support the development of treatments and vaccines. https://www.covid19dataportal.org/structures?db=structures1444 days ago
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