BOL

#To install perl modules perl -MCPAN -e shell # go to CPAN install modeinstall Bundle::CPAN # update CPANreload cpaninstall Set::Scalar

Common one-liner for bioinformatician !

WGDdetector pipeline that integrates all analyses including gene family constructing, dS estimating and phasing, and outputting the dS values of each paralogs pairs processed with only one command. We further chose four species (Arabidopsis...

wgd is a easy to use command-line tool for KS distribution construction named wgd. The wgd suite provides commonly used KS and colinearity analysis workflows together with tools for modeling and visualization, rendering these...

A web applet for browsing protein-protein interactions was implemented. It enables the display of interaction relationships, based upon neighboring distance and biological function. Availability: The Java applet is available at...

We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during annotation jamborees, genome comparison and for use by developers...

Blast database version5 tutorial https://ftp.ncbi.nlm.nih.gov/blast/db/v5/blastdbv5.pdf

Kill all screen commands. screen -ls | perl -ne '/(\d+)\./;print $1' | xargs -l kill -9 #kill #screen

Sort and get the best first of duplicated lines $ sort -k3rn file | sort -u -k1,1 #Sort #Duplicated #Value

Bioinformatics jobs at https://jobrxiv.org/?search_keywords=bioinformatics

Senior bioinformatics scientist at NIPGR http://www.nipgr.ac.in/careers/vacancies_latest.php#vacancy2