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Remove duplicated lines from text file. $ awk '!seen[$0]++' allIds #duplicate #lines #remove #awk

orthodotter -h -------------------------------------------------------------------------------- orthodotter - Plot orthologous genes on an oxford grid. -f <file> : input file, containing orthologous genes, default is stdin...

Bioinformatics tools can also be accepted by "Animal Genetics" journal http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1365-2052

RCB Young Investigator Awards http://www.rcb.res.in/index.php

Try The BERI Fellows will be provided with a consolidated fellowship of Rs. 60,000 per month. https://www.ncbs.res.in/academic/postdoc-beri-whats-included

Toy example comparing several MSA algorithms http://wiki.bits.vib.be/index.php/Multiple_sequence_alignment #Alignment #MSA #Algorithms

N50 is a statistic that is widely used to describe genome assemblies. It describes an average length of a set of sequences, but the average is not the mean or median length. Rather it is the length of the sequence that takes the sum length of all...

Scripts for Phylogenetics at https://github.com/gigascience/paper-jarvis2014 #Phylogenetics #Script #Perl

Replace space with tab. $ awk -v OFS="\t" '$1=$1' file1 #tab #space #replace #awk

analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancestor -- Any organism, population, or species from which some other organism, population, or species is descended by...

RAMI, which clusters related nodes in a phylogenetic tree based on the patristic distance. RAMI also produces indices of cluster properties and other indices used in population and community studies on-the-fly. Availability: RAMI is licensed...

Reasonably fast method to compute the #patristic #distance between a pair of #species in a large tree http://blog.phytools.org/2015/10/new-reasonably-fast-method-to-compute.html

PATRISTICv1.0 is a java program that calculates patristic distances from large trees in a range of file formats and allows graphical and statistical interpretation of distance matrices calculated by other programs.