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- BioStar@biostar
BioStar bookmarked Kubernetes: open-source system for automating deployment, scaling, and management of containerized... 1738 days ago

It groups containers that make up an application into logical units for easy management and discovery. Kubernetes builds upon 15 years of experience of running production workloads at Google, combined with best-of-breed ideas and practices from...

https://kubernetes.io/
- BioStar@biostar
BioStar commented on a bookmark Nextflow: Data-driven computational pipelines 1738 days ago

A collection of high quality Nextflow pipelines https://github.com/nf-core/
- BioStar@biostar
BioStar bookmarked Nextflow: Data-driven computational pipelines 1738 days ago

Nextflow enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages. Its fluent DSL simplifies the implementation and the deployment of...

https://www.nextflow.io/
Comments
- BioStar@biostar
  
  BioStar 1738 days ago
  A collection of high quality Nextflow pipelines
  https://github.com/nf-core/
- BioStar@biostar
  
  BioStar 1738 days ago
  A Review of Scalable Bioinformatics Pipelines by Bjørn Fjukstad & Lars Ailo Bongo
  https://link.springer.com/article/10.1007/s41019-017-0047-z
- Jit@jit.aber
Jit posted to the wire 1739 days ago

Bioinformatics walkin at IGIB https://www.igib.res.in/sites/default/files/25022020WALKIN.pdf #WalkIN #IGIB #Delhi
- Jit@jit.aber
Jit commented on the bio-script Install Parrot Virtual Machine ! 1739 days ago

One of the most attractive and secure OS https://parrotlinux.org/ #Parrot #OS
- Jit@jit.aber
Jit posted to the wire 1739 days ago

Open source LaTex editing tools https://www.texstudio.org/ #LaTex #Edit #Free
- Jit@jit.aber
Jit answered the question How to create a Linux OS bootable drive ? 1739 days ago

Download ISO (ISO is a special file format that represents the content of a small storage device) dd (and its derivatives) is a command line tool integrated in every UNIX and UNIX-like system, and it can be used to write the ISO file into a block...
- Surabhi Chaudhary@surabhi
Surabhi Chaudhary asked How to create a Linux OS bootable drive ? 1739 days ago
- Jit@jit.aber
Jit created a new bio-script Install Parrot Virtual Machine ! 1739 days ago
Comments
- Jit@jit.aber
  
  Jit 1739 days ago
  One of the most attractive and secure OS https://parrotlinux.org/ #Parrot #OS
- Rahul Nayak@rahul
  
  Rahul Nayak 1737 days ago
  File system of Parrot http://ccl.cse.nd.edu/software/parrot/
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark The Raku Programming Language 1739 days ago

Nice discussion here about Raku and Python https://news.ycombinator.com/item?id=21227571
- Jit@jit.aber
Jit commented on a bookmark Instructions for Creating Your Own R Package 1739 days ago

Notes/Blog by Hilary Parker is also very informative https://hilaryparker.com/2014/04/29/writing-an-r-package-from-scratch/
- Jit@jit.aber
Jit commented on a bookmark Instructions for Creating Your Own R Package 1739 days ago

This is one of the best tutorial by Fong Chun Chan http://tinyheero.github.io/jekyll/update/2015/07/26/making-your-first-R-package.html
- Jit@jit.aber
Jit bookmarked Instructions for Creating Your Own R Package 1739 days ago

The following is a step-by-step guide to creating your own R package. Even beyond this course, youmay find this useful for storing functions you create for your own research or for editing existingR packages to suit your needs. This guide...

http://web.mit.edu/insong/www/pdf/rpackage_instructions.pdf
Comments
- Jit@jit.aber
  
  Jit 1739 days ago
  This is one of the best tutorial by Fong Chun Chan
  http://tinyheero.github.io/jekyll/update/2015/07/26/making-your-first-R-package.html
- Jit@jit.aber
  
  Jit 1739 days ago
  Notes/Blog by Hilary Parker is also very informative https://hilaryparker.com/2014/04/29/writing-an-r-package-from-scratch/
- Rahul Nayak@rahul
Rahul Nayak commented on a bookmark Biological databases ! 1740 days ago

all GATK bundle at ftp://ftp.broadinstitute.org/bundle/hg38/
- biogeek@biogeek
biogeek created a new bio-script Bash oneliner to extract all ids from a multifasta file 1740 days ago
- biogeek@biogeek
biogeek bookmarked Carefully opt for human reference genome 1740 days ago

Heng Li posted several issues with the human reference genomes given in these resources and suggests the following compressed FASTA file to be used as hg38/GRCh38 human reference genome. if you map reads to GRCh38 or hg38, use the...

http://lh3.github.io/2017/11/13/which-human-reference-genome-to-use
- biogeek@biogeek
biogeek commented on the bio-script Install snakemake and activate on conda 1740 days ago

conda clean --all
- biogeek@biogeek
biogeek created a new bio-script Install snakemake and activate on conda 1740 days ago
Comments
- biogeek@biogeek
  
  biogeek 1740 days ago
  conda clean --all
- eliabrodsky@eliabrodsky
eliabrodsky is now a friend with biogeek 1740 days ago
eliabrodsky@eliabrodsky
biogeek@biogeek
- biogeek@biogeek
biogeek is now a friend with eliabrodsky 1740 days ago
biogeek@biogeek
eliabrodsky@eliabrodsky

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